C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 444
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592949 ZNF444-013 ENSG00000167685 9606 + 19:56141321-56160893 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000592949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000592949 5.713±0.00 8.627±0.00 0.378±0.00 3.303±2.25 8.142±0.00 18.644±0.00 6.260±0.00 7.426±3.61 6.507±5.73 7.029±6.46 3.243±2.20 9.252±5.89 4.779±0.65 11.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Z CIL_00045Z_0001 CGP 19:56087366-56160893
CIL_00046H CIL_00046H_0001 CGP 19:56132599-56185775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108566 Zfp444-003 protein_coding Mus_musculus 0 789
ENSMUST00000054680 Zfp444-002 protein_coding Mus_musculus 0 789
ENSMUST00000108567 Zfp444-001 protein_coding Mus_musculus 0 789
ENSMUST00000108565 Zfp444-009 protein_coding Mus_musculus 0 339

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