C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: envoplakin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167880 EVPL 9606 - 17:76004502-76027452 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301607 EVPL-001 76006845-76027452 protein_coding
  ENST00000586740 EVPL-002 76007081-76027231 protein_coding
  ENST00000587569 EVPL-003 76007082-76027231 retained_intron
  ENST00000589231 EVPL-005 76004502-76007441 protein_coding
  ENST00000593037 EVPL-004 76011521-76012291 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301607ENST00000586740ENST00000587569ENST00000589231
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301607 0.167±0.00 0.050±0.00 0.399±0.00 N/A 1.463±1.16 0.018±0.00 2.451±0.00 0.836±0.00 6.329±0.00 N/A 7.549±6.52 1.246±0.91 0.189±0.05
ENST00000586740 N/A N/A 0.006±0.00 0.738±0.00 N/A 0.028±0.00 0.028±0.00 0.011±0.00 0.615±0.00 0.034±0.00 0.504±0.00 N/A N/A
ENST00000587569 N/A N/A N/A 0.412±0.00 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589231 N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078N CIL_00078N_0001 CGP 17:76004502-76072653

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001533 IDA cornified envelope
GO:0005198 IDA structural molecule activity
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008544 TAS epidermis development
GO:0018149 IDA peptide cross-linking
GO:0030054 IEA cell junction
GO:0030216 IDA keratinocyte differentiation
GO:0030674 IDA protein binding, bridging
GO:0031424 IEA keratinization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019808 evpla envoplakin a protein_coding Danio_rerio
ENSDARG00000059002 evplb envoplakin b protein_coding Danio_rerio
ENSMUSG00000034282 Evpl envoplakin protein_coding Mus_musculus

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