C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167880-ENSG00000167881 CGP 9606 17:76004502-76072653
GeneTranscriptPositionBiotype
ENSG00000167880 (EVPL)
envoplakin 		ENST00000301607 (EVPL-001) 76006845-76027452 protein_coding
ENST00000586740 (EVPL-002) 76007081-76027231 protein_coding
ENST00000587569 (EVPL-003) 76007082-76027231 retained_intron
ENST00000589231 (EVPL-005) 76004502-76007441 protein_coding
ENST00000593037 (EVPL-004) 76011521-76012291 retained_intron
ENSG00000167881 (SRP68)
signal recognition particle 68kDa 		ENST00000307877 (SRP68-001) 76039103-76072653 protein_coding
ENST00000539137 (SRP68-002) 76039106-76072507 protein_coding
ENST00000542536 (SRP68-004) 76039106-76053656 processed_transcript
ENST00000585539 (SRP68-010) 76061175-76064022 processed_transcript
ENST00000586859 (SRP68-013) 76043375-76046061 retained_intron
ENST00000587864 (SRP68-011) 76061150-76064127 retained_intron
ENST00000588643 (SRP68-006) 76039104-76041628 retained_intron
ENST00000588736 (SRP68-005) 76044754-76049647 retained_intron
ENST00000590833 (SRP68-012) 76057397-76060742 retained_intron
ENST00000591272 (SRP68-008) 76064038-76072507 nonsense_mediated_decay
ENST00000592704 (SRP68-009) 76039551-76072497 nonsense_mediated_decay
ENST00000602720 (SRP68-201) 76038775-76053648 protein_coding
ENSG00000250506 (CDK3)
cyclin-dependent kinase 3 		ENST00000425876 (CDK3-001) 76001338-76005999 protein_coding
ENST00000586261 (CDK3-003) 76001715-76003366 protein_coding
ENST00000588812 (CDK3-002) 76000906-76002518 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00078N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034282-ENSMUSG00000020780 CGP 10090 11:116220559-116274217
GeneTranscriptPositionBiotype
ENSMUSG00000020780 (Srp68)
signal recognition particle 68 		ENSMUST00000021133 (Srp68-001) 116245166-116274217 protein_coding
ENSMUST00000106425 (Srp68-002) 116245166-116274135 protein_coding
ENSMUST00000127205 (Srp68-003) 116245166-116274217 processed_transcript
ENSMUST00000128808 (Srp68-004) 116248796-116261338 processed_transcript
ENSMUSG00000034282 (Evpl)
envoplakin 		ENSMUST00000037007 (Evpl-001) 116220559-116238077 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078N_0001ENSG00000167880ENST00000301607ENST00000586740ENST00000587569ENST00000589231ENST00000593037ENSG00000167881ENST00000307877ENST00000539137ENST00000542536ENST00000585539ENST00000586859ENST00000587864ENST00000588643ENST00000588736ENST00000590833ENST00000591272ENST00000592704ENST00000602720ENSG00000250506ENST00000425876ENST00000586261ENST00000588812CIL_00078N_0002ENSMUSG00000020780ENSMUST00000021133ENSMUST00000106425ENSMUST00000127205ENSMUST00000128808ENSMUSG00000034282ENSMUST00000037007
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078N_0001ENSG00000167880ENST00000301607ENST00000586740ENST00000587569ENST00000589231ENSG00000167881ENST00000307877ENST00000539137ENST00000590833ENST00000591272ENST00000592704ENST00000602720ENSG00000250506ENST00000425876CIL_00078N_0002ENSMUSG00000020780ENSMUST00000021133ENSMUST00000106425ENSMUST00000127205ENSMUSG00000034282ENSMUST00000037007
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167880 ENST00000301607 0.167±0.00 0.050±0.00 N/A 0.399±0.00 N/A 1.463±1.16 0.018±0.00 2.451±0.00 0.836±0.00 6.329±0.00 N/A 7.549±6.52 1.246±0.91 0.189±0.05
ENST00000586740 N/A N/A N/A 0.006±0.00 0.738±0.00 N/A 0.028±0.00 0.028±0.00 0.011±0.00 0.615±0.00 0.034±0.00 0.504±0.00 N/A N/A
ENST00000587569 N/A N/A N/A N/A 0.412±0.00 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589231 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167881 ENST00000307877 28.665±0.00 7.916±0.00 2.003±0.00 10.046±7.12 9.581±3.81 14.485±10.55 7.325±6.34 10.861±7.93 6.030±0.89 16.904±11.66 23.747±21.35 21.508±11.30 28.365±3.45 16.449±1.73
ENST00000539137 N/A 9.527±0.00 N/A 3.075±1.86 7.410±0.00 N/A N/A 3.037±1.52 8.652±0.00 N/A 9.686±8.91 1.434±0.00 N/A N/A
ENST00000542536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590833 N/A N/A 5.517±0.00 N/A N/A N/A N/A 9.229±0.00 N/A N/A 7.886±0.00 N/A N/A N/A
ENST00000591272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.182±0.00 18.817±0.00 11.086±0.00
ENST00000592704 N/A N/A N/A N/A N/A N/A 3.903±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000602720 N/A N/A N/A 2.094±0.00 N/A N/A N/A 1.839±0.00 3.733±0.00 N/A 2.797±0.00 8.622±0.77 7.557±1.26 N/A
ENSG00000250506 ENST00000425876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.320±0.00
ENST00000586261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020780 ENSMUST00000021133 14.225±4.36 3.360±1.01 34.789±2.22 21.551±2.09 5.845±1.74 8.718±3.03 11.725±0.37 13.300±3.21 22.054±12.64 11.503±3.04 32.561±1.41 18.766±9.26 42.478±15.52 20.412±4.35
ENSMUST00000106425 3.745±0.78 3.367±0.55 N/A 3.412±0.00 5.304±2.27 4.244±0.31 N/A 4.558±1.14 3.863±0.12 2.727±0.00 N/A 6.889±2.04 3.829±0.00 N/A
ENSMUST00000127205 N/A 2.407±0.00 N/A N/A 2.980±0.00 N/A N/A N/A N/A N/A N/A N/A 7.217±0.00 3.818±0.00
ENSMUST00000128808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034282 ENSMUST00000037007 0.309±0.28 0.242±0.12 5.483±0.44 0.890±0.95 0.632±0.33 6.494±1.54 0.036±0.01 2.998±0.34 0.080±0.09 4.173±3.57 0.043±0.03 1.114±0.47 2.221±2.59 0.727±0.87

Loading