C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167889 MGAT5B 9606 + 17:76868456-76950393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301618 MGAT5B-001 76868456-76950377 protein_coding
  ENST00000374998 MGAT5B-005 76868824-76914098 processed_transcript
  ENST00000428789 MGAT5B-002 76872647-76950382 protein_coding
  ENST00000563153 MGAT5B-009 76943948-76948896 processed_transcript
  ENST00000563627 MGAT5B-008 76923850-76925020 processed_transcript
  ENST00000565043 MGAT5B-004 76872711-76949447 nonsense_mediated_decay
  ENST00000565675 MGAT5B-003 76868716-76882527 protein_coding
  ENST00000568598 MGAT5B-006 76946250-76950393 retained_intron
  ENST00000569840 MGAT5B-010 76868456-76950377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000301618ENST00000374998ENST00000428789ENST00000565043ENST00000565675ENST00000568598ENST00000569840
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000301618 0.080±0.00 N/A N/A N/A 0.038±0.00 N/A 0.072±0.00 N/A N/A 0.150±0.00 0.600±0.00 N/A
ENST00000374998 N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A 0.073±0.00 0.156±0.00 N/A N/A
ENST00000428789 N/A N/A 0.531±0.00 0.067±0.00 N/A N/A N/A N/A N/A N/A 0.885±0.00 N/A
ENST00000565043 N/A N/A N/A N/A N/A 0.021±0.00 0.119±0.00 0.030±0.00 N/A 0.129±0.07 0.358±0.13 N/A
ENST00000565675 N/A N/A N/A N/A 0.175±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000568598 N/A N/A N/A 0.093±0.00 0.045±0.00 N/A N/A 0.035±0.00 0.124±0.00 N/A N/A N/A
ENST00000569840 0.033±0.00 0.632±0.00 9.906±7.97 N/A 0.021±0.00 N/A N/A N/A N/A N/A 0.446±0.00 0.546±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019B CIL_00019B_0001 CGP 17:76735865-76950393
CIL_000198 CIL_000198_0001 CGP 17:76868456-77217101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0006487 IEA protein N-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0030144 IEA alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087086 MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B protein_coding Danio_rerio
ENSMUSG00000043857 Mgat5b mannoside acetylglucosaminyltransferase 5, isoenzyme B protein_coding Mus_musculus

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