C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428789 MGAT5B-002 ENSG00000167889 9606 + 17:76872647-76950382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastPlacentaENST00000428789
Transcript ID Brain Breast Placenta
ENST00000428789 0.531±0.00 0.067±0.00 0.885±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019B CIL_00019B_0001 CGP 17:76735865-76950393
CIL_000198 CIL_000198_0001 CGP 17:76868456-77217101

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IEA Golgi apparatus
GO:0006487 IEA protein N-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0030144 IEA alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103027 Mgat5b-001 protein_coding Mus_musculus 0 2625
ENSMUST00000126757 Mgat5b-002 retained_intron Mus_musculus 0 1146
ENSMUST00000136584 Mgat5b-004 protein_coding Mus_musculus 0 880
ENSMUST00000139905 Mgat5b-003 processed_transcript Mus_musculus 0 795
ENSDART00000126107 MGAT5B-201 protein_coding Danio_rerio 0 536

Loading