C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) II (DNA directed) polypeptide G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168002 POLR2G 9606 + 11:62761544-62766710 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301788 POLR2G-001 62761544-62766710 protein_coding
  ENST00000524819 POLR2G-002 62761583-62766695 nonsense_mediated_decay
  ENST00000525455 POLR2G-006 62761580-62766673 nonsense_mediated_decay
  ENST00000526368 POLR2G-008 62762754-62766707 retained_intron
  ENST00000527435 POLR2G-004 62761637-62766710 retained_intron
  ENST00000531944 POLR2G-003 62761617-62766710 nonsense_mediated_decay
  ENST00000531996 POLR2G-007 62761795-62765724 nonsense_mediated_decay
  ENST00000533442 POLR2G-005 62761565-62765356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301788ENST00000525455ENST00000526368ENST00000527435ENST00000531944ENST00000531996ENST00000533442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301788 26.049±0.00 29.855±0.00 2.874±0.00 25.677±14.78 16.332±12.30 16.685±11.23 7.297±5.81 23.051±17.66 10.316±5.86 14.809±11.82 5.172±2.13 31.833±20.11 51.151±12.82 25.486±8.32
ENST00000525455 N/A 6.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.498±0.00 13.932±0.00 7.593±0.00
ENST00000527435 N/A N/A N/A N/A 1.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531944 N/A 3.405±0.00 N/A N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531996 N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A 1.586±0.00 N/A N/A N/A
ENST00000533442 N/A N/A N/A N/A 4.559±0.00 N/A 1.792±0.00 3.096±0.00 N/A N/A 4.323±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000291 IBA nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0000932 IBA cytoplasmic mRNA processing body
GO:0003676 IEA nucleic acid binding
GO:0003697 IBA single-stranded DNA binding
GO:0003727 IBA single-stranded RNA binding
GO:0003899 IEA:IBA DNA-directed RNA polymerase activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005665 IDA DNA-directed RNA polymerase II, core complex
GO:0005730 IDA nucleolus
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0006367 IBA transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0006915 IEA apoptotic process
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0031369 IBA translation initiation factor binding
GO:0045948 IBA positive regulation of translational initiation
GO:0050434 TAS positive regulation of viral transcription
GO:0060213 IBA positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056127 polr2gl polymerase (RNA) II (DNA directed) polypeptide G-like protein_coding Danio_rerio
ENSMUSG00000071662 Polr2g polymerase (RNA) II (DNA directed) polypeptide G protein_coding Mus_musculus

Loading