C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301788 POLR2G-001 ENSG00000168002 9606 + 11:62761544-62766710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301788 26.049±0.00 29.855±0.00 2.874±0.00 25.677±14.78 16.332±12.30 16.685±11.23 7.297±5.81 23.051±17.66 10.316±5.86 14.809±11.82 5.172±2.13 31.833±20.11 51.151±12.82 25.486±8.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000291 IBA nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0000932 IBA cytoplasmic mRNA processing body
GO:0003676 IEA nucleic acid binding
GO:0003697 IBA single-stranded DNA binding
GO:0003727 IBA single-stranded RNA binding
GO:0003899 IEA:IBA DNA-directed RNA polymerase activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005665 IDA DNA-directed RNA polymerase II, core complex
GO:0005730 IDA nucleolus
GO:0006281 TAS DNA repair
GO:0006283 TAS transcription-coupled nucleotide-excision repair
GO:0006289 TAS nucleotide-excision repair
GO:0006351 IEA transcription, DNA-templated
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0006367 IBA transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0006915 IEA apoptotic process
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0031369 IBA translation initiation factor binding
GO:0045948 IBA positive regulation of translational initiation
GO:0050434 TAS positive regulation of viral transcription
GO:0060213 IBA positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096261 Polr2g-201 protein_coding Mus_musculus 0 691

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