C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168092 PAFAH1B2 9606 + 11:117144267-117176894 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304808 PAFAH1B2-007 117144293-117167992 protein_coding
  ENST00000419197 PAFAH1B2-201 117144284-117176874 protein_coding
  ENST00000526888 PAFAH1B2-002 117144309-117176894 processed_transcript
  ENST00000527958 PAFAH1B2-001 117144267-117171048 protein_coding
  ENST00000529887 PAFAH1B2-006 117144298-117176422 protein_coding
  ENST00000530272 PAFAH1B2-004 117144344-117176137 protein_coding
  ENST00000533206 PAFAH1B2-008 117144382-117164122 retained_intron
  ENST00000533677 PAFAH1B2-010 117159387-117161263 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304808ENST00000527958ENST00000533206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.447±0.00
ENST00000527958 24.601±0.00 15.433±0.00 4.184±0.00 25.684±2.12 13.451±3.88 11.252±1.19 7.747±2.67 10.028±5.68 6.667±3.19 11.083±0.63 4.271±3.35 13.499±4.25 11.205±2.63 21.082±4.46
ENST00000533206 N/A N/A N/A N/A 5.812±0.00 N/A 8.341±0.00 N/A 6.527±0.00 N/A N/A 15.058±2.36 30.358±0.00 38.731±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003847 IEA 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0006629 TAS lipid metabolic process
GO:0007283 IEA spermatogenesis
GO:0007420 IEA brain development
GO:0008152 IEA metabolic process
GO:0016042 IEA lipid catabolic process
GO:0016239 IMP positive regulation of macroautophagy
GO:0016787 IEA hydrolase activity
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035352 pafah1b2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 protein_coding Danio_rerio
ENSMUSG00000003131 Pafah1b2 platelet-activating factor acetylhydrolase, isoform 1b, subunit 2 protein_coding Mus_musculus

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