C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527958 PAFAH1B2-001 ENSG00000168092 9606 + 11:117144267-117171048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527958 24.601±0.00 15.433±0.00 4.184±0.00 25.684±2.12 13.451±3.88 11.252±1.19 7.747±2.67 10.028±5.68 6.667±3.19 11.083±0.63 4.271±3.35 13.499±4.25 11.205±2.63 21.082±4.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003847 IEA 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0006629 TAS:IEA lipid metabolic process
GO:0007283 IEA spermatogenesis
GO:0007420 IEA brain development
GO:0016042 IEA lipid catabolic process
GO:0016239 IMP positive regulation of macroautophagy
GO:0016788 IEA hydrolase activity, acting on ester bonds
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172450 Pafah1b2-201 protein_coding Mus_musculus 0 1496

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