C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168259 DNAJC7 9606 - 17:41976433-42021376 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316603 DNAJC7-003 41976664-42017419 protein_coding
  ENST00000426588 DNAJC7-005 41976479-42017151 protein_coding
  ENST00000457167 DNAJC7-001 41976433-42017653 protein_coding
  ENST00000585693 DNAJC7-022 41981595-41982403 retained_intron
  ENST00000585866 DNAJC7-012 41994870-42017423 nonsense_mediated_decay
  ENST00000586240 DNAJC7-004 42014590-42017153 retained_intron
  ENST00000586335 DNAJC7-020 41981984-41988873 nonsense_mediated_decay
  ENST00000587380 DNAJC7-008 42012982-42014937 retained_intron
  ENST00000587727 DNAJC7-023 41976452-41982321 protein_coding
  ENST00000588641 DNAJC7-013 41988761-42017423 protein_coding
  ENST00000588814 DNAJC7-002 41976541-42017419 nonsense_mediated_decay
  ENST00000589547 DNAJC7-016 42000557-42017002 processed_transcript
  ENST00000589576 DNAJC7-014 41990311-42017162 protein_coding
  ENST00000589586 DNAJC7-015 41994870-42017145 protein_coding
  ENST00000589773 DNAJC7-011 41994875-42018518 protein_coding
  ENST00000589810 DNAJC7-006 41987677-42017151 nonsense_mediated_decay
  ENST00000590197 DNAJC7-007 41984306-41986067 retained_intron
  ENST00000590348 DNAJC7-010 41988826-42018522 protein_coding
  ENST00000590774 DNAJC7-017 41990354-42016698 protein_coding
  ENST00000590847 DNAJC7-021 41987437-41988822 retained_intron
  ENST00000590886 DNAJC7-018 41996321-42011275 protein_coding
  ENST00000591153 DNAJC7-019 41989421-41992782 processed_transcript
  ENST00000591787 DNAJC7-009 41996326-42021376 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316603ENST00000426588ENST00000457167ENST00000586335ENST00000588814ENST00000590197
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316603 39.139±0.00 49.712±0.00 N/A N/A 24.349±0.00 28.222±0.00 17.299±0.00 29.516±26.22 15.952±0.00 14.853±0.00 24.821±0.00 123.361±88.27 99.336±0.00 51.565±11.49
ENST00000426588 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.239±0.00 15.430±0.00 N/A N/A N/A
ENST00000457167 N/A N/A 4.476±0.00 9.864±0.00 7.781±0.00 10.064±4.47 8.244±4.17 3.243±0.00 5.737±0.00 5.468±0.00 3.063±0.00 30.472±10.09 17.880±2.29 N/A
ENST00000586335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 106.093±0.00 N/A 47.112±0.00
ENST00000588814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.365±0.00 N/A N/A
ENST00000590197 0.653±0.00 1.585±0.00 0.537±0.00 0.671±0.49 0.809±0.28 0.398±0.05 0.270±0.11 0.341±0.26 0.190±0.03 0.790±0.24 0.105±0.00 1.430±0.68 0.343±0.22 1.047±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KT CIL_0000KT_0002 CGP 17:41930635-41977731
CIL_0006EX CIL_0006EX_0001 CGP 17:41966741-42021376
CIL_000429 CIL_000429_0002 CGP 17:41976433-42025644

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006457 TAS protein folding
GO:0016020 IDA membrane
GO:0031072 IPI heat shock protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0070389 IDA chaperone cofactor-dependent protein refolding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058148 dnajc7 DnaJ (Hsp40) homolog, subfamily C, member 7 protein_coding Danio_rerio
ENSDARG00000091245 dnajc7 DnaJ (Hsp40) homolog, subfamily C, member 7 protein_coding Danio_rerio
ENSMUSG00000014195 Dnajc7 DnaJ (Hsp40) homolog, subfamily C, member 7 protein_coding Mus_musculus

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