C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090531-ENSDARG00000091351 CGP 7955 3:17640086-17673215
GeneTranscriptPositionBiotype
ENSDARG00000090531 (ttc25)
tetratricopeptide repeat domain 25 		ENSDART00000128407 (ttc25-001) 17640086-17656333 protein_coding
ENSDARG00000091351 (cnp)
2',3'-cyclic nucleotide 3' phosphodiesterase 		ENSDART00000112937 (cnp-202) 17668781-17673214 protein_coding
ENSDART00000135150 (cnp-005) 17662115-17669449 protein_coding
ENSDART00000136892 (cnp-004) 17662020-17669996 protein_coding
ENSDART00000138589 (cnp-011) 17662033-17669110 protein_coding
ENSDART00000140983 (cnp-009) 17662092-17669996 protein_coding
ENSDART00000141121 (cnp-007) 17662543-17669146 protein_coding
ENSDART00000142784 (cnp-001) 17662020-17673215 protein_coding
ENSDART00000146305 (cnp-003) 17662020-17669950 protein_coding
ENSDART00000147976 (cnp-010) 17662096-17669438 protein_coding
ENSDART00000148303 (cnp-008) 17662437-17668804 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000KT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204815-ENSG00000173786 CGP 9606 17:41930635-41977731
GeneTranscriptPositionBiotype
ENSG00000168259 (DNAJC7)
DnaJ (Hsp40) homolog, subfamily C, member 7 		ENST00000316603 (DNAJC7-003) 41976664-42017419 protein_coding
ENST00000426588 (DNAJC7-005) 41976479-42017151 protein_coding
ENST00000457167 (DNAJC7-001) 41976433-42017653 protein_coding
ENST00000585693 (DNAJC7-022) 41981595-41982403 retained_intron
ENST00000585866 (DNAJC7-012) 41994870-42017423 nonsense_mediated_decay
ENST00000586240 (DNAJC7-004) 42014590-42017153 retained_intron
ENST00000586335 (DNAJC7-020) 41981984-41988873 nonsense_mediated_decay
ENST00000587380 (DNAJC7-008) 42012982-42014937 retained_intron
ENST00000587727 (DNAJC7-023) 41976452-41982321 protein_coding
ENST00000588641 (DNAJC7-013) 41988761-42017423 protein_coding
ENST00000588814 (DNAJC7-002) 41976541-42017419 nonsense_mediated_decay
ENST00000589547 (DNAJC7-016) 42000557-42017002 processed_transcript
ENST00000589576 (DNAJC7-014) 41990311-42017162 protein_coding
ENST00000589586 (DNAJC7-015) 41994870-42017145 protein_coding
ENST00000589773 (DNAJC7-011) 41994875-42018518 protein_coding
ENST00000589810 (DNAJC7-006) 41987677-42017151 nonsense_mediated_decay
ENST00000590197 (DNAJC7-007) 41984306-41986067 retained_intron
ENST00000590348 (DNAJC7-010) 41988826-42018522 protein_coding
ENST00000590774 (DNAJC7-017) 41990354-42016698 protein_coding
ENST00000590847 (DNAJC7-021) 41987437-41988822 retained_intron
ENST00000590886 (DNAJC7-018) 41996321-42011275 protein_coding
ENST00000591153 (DNAJC7-019) 41989421-41992782 processed_transcript
ENST00000591787 (DNAJC7-009) 41996326-42021376 protein_coding
ENSG00000173786 (CNP)
2',3'-cyclic nucleotide 3' phosphodiesterase 		ENST00000393888 (CNP-002) 41966815-41975176 protein_coding
ENST00000393892 (CNP-001) 41966741-41977731 protein_coding
ENST00000441615 (CNP-004) 41966882-41968557 protein_coding
ENST00000472031 (CNP-003) 41966763-41974228 protein_coding
ENST00000486438 (CNP-005) 41971609-41973962 retained_intron
ENST00000585452 (CNP-011) 41967783-41968585 protein_coding
ENST00000587679 (CNP-010) 41966798-41968669 protein_coding
ENST00000589772 (CNP-007) 41967333-41968486 protein_coding
ENST00000591945 (CNP-008) 41966795-41968175 processed_transcript
ENST00000592105 (CNP-012) 41971288-41973817 processed_transcript
ENST00000592446 (CNP-009) 41966798-41968503 processed_transcript
ENST00000592861 (CNP-013) 41970281-41971797 retained_intron
ENSG00000204815 (TTC25)
tetratricopeptide repeat domain 25 		ENST00000377540 (TTC25-002) 41930656-41965651 protein_coding
ENST00000585530 (TTC25-004) 41935298-41937041 nonsense_mediated_decay
ENST00000591658 (TTC25-001) 41930645-41965630 nonsense_mediated_decay
ENST00000593239 (TTC25-003) 41930635-41938690 nonsense_mediated_decay
ENST00000617460 (TTC25-201) 41930664-41965648 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000KT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000006784-ENSMUSG00000006782 CGP 10090 11:100545607-100591729
GeneTranscriptPositionBiotype
ENSMUSG00000006782 (Cnp)
2',3'-cyclic nucleotide 3' phosphodiesterase 		ENSMUST00000103120 (Cnp-001) 100574904-100581728 protein_coding
ENSMUST00000147403 (Cnp-003) 100575891-100591729 processed_transcript
ENSMUST00000148034 (Cnp-004) 100575112-100576450 processed_transcript
ENSMUST00000150414 (Cnp-002) 100575524-100581728 processed_transcript
ENSMUSG00000006784 (Ttc25)
tetratricopeptide repeat domain 25 		ENSMUST00000006976 (Ttc25-005) 100545694-100572568 protein_coding
ENSMUST00000092684 (Ttc25-001) 100545607-100571963 protein_coding
ENSMUST00000127389 (Ttc25-004) 100549547-100550328 retained_intron
ENSMUST00000132143 (Ttc25-002) 100545694-100569805 retained_intron
ENSMUST00000150331 (Ttc25-003) 100545710-100550210 retained_intron
ENSMUSG00000014195 (Dnajc7)
DnaJ (Hsp40) homolog, subfamily C, member 7 		ENSMUST00000014339 (Dnajc7-001) 100582818-100620168 protein_coding
ENSMUST00000128414 (Dnajc7-008) 100583264-100585492 processed_transcript
ENSMUST00000129346 (Dnajc7-002) 100582818-100584786 processed_transcript
ENSMUST00000132886 (Dnajc7-003) 100598336-100619659 processed_transcript
ENSMUST00000136199 (Dnajc7-009) 100584340-100591028 processed_transcript
ENSMUST00000137688 (Dnajc7-006) 100590894-100619597 processed_transcript
ENSMUST00000146840 (Dnajc7-005) 100592964-100613342 protein_coding
ENSMUST00000148098 (Dnajc7-007) 100591019-100596708 processed_transcript
ENSMUST00000154972 (Dnajc7-004) 100597427-100619579 processed_transcript
ENSMUST00000155152 (Dnajc7-010) 100590887-100619576 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KT_0001ENSDARG00000090531ENSDART00000128407ENSDARG00000091351ENSDART00000112937ENSDART00000135150ENSDART00000136892ENSDART00000138589ENSDART00000140983ENSDART00000141121ENSDART00000142784ENSDART00000146305ENSDART00000147976ENSDART00000148303CIL_0000KT_0002ENSG00000168259ENST00000316603ENST00000426588ENST00000457167ENST00000585693ENST00000585866ENST00000586240ENST00000586335ENST00000587380ENST00000587727ENST00000588641ENST00000588814ENST00000589547ENST00000589576ENST00000589586ENST00000589773ENST00000589810ENST00000590197ENST00000590348ENST00000590774ENST00000590847ENST00000590886ENST00000591153ENST00000591787ENSG00000173786ENST00000393888ENST00000393892ENST00000441615ENST00000472031ENST00000486438ENST00000585452ENST00000587679ENST00000589772ENST00000591945ENST00000592105ENST00000592446ENST00000592861ENSG00000204815ENST00000377540ENST00000585530ENST00000591658ENST00000593239ENST00000617460CIL_0000KT_0003ENSMUSG00000006782ENSMUST00000103120ENSMUST00000147403ENSMUST00000148034ENSMUST00000150414ENSMUSG00000006784ENSMUST00000006976ENSMUST00000092684ENSMUST00000127389ENSMUST00000132143ENSMUST00000150331ENSMUSG00000014195ENSMUST00000014339ENSMUST00000128414ENSMUST00000129346ENSMUST00000132886ENSMUST00000136199ENSMUST00000137688ENSMUST00000146840ENSMUST00000148098ENSMUST00000154972ENSMUST00000155152
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KT_0001ENSDARG00000090531ENSDART00000128407ENSDARG00000091351ENSDART00000112937ENSDART00000142784ENSDART00000146305CIL_0000KT_0002ENSG00000168259ENST00000316603ENST00000426588ENST00000457167ENST00000586335ENST00000588814ENST00000590197ENSG00000173786ENST00000393888ENST00000393892ENSG00000204815ENST00000377540ENST00000585530ENST00000591658ENST00000593239ENST00000617460CIL_0000KT_0003ENSMUSG00000006782ENSMUST00000103120ENSMUSG00000006784ENSMUST00000006976ENSMUST00000092684ENSMUST00000132143ENSMUST00000150331ENSMUSG00000014195ENSMUST00000014339ENSMUST00000129346ENSMUST00000136199
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000090531 ENSDART00000128407 N/A N/A N/A 0.046±0.01 N/A N/A 0.027±0.00 0.132±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000091351 ENSDART00000112937 N/A N/A N/A 3.292±1.58 N/A N/A 4.293±2.28 21.112±7.58 0.232±0.00 N/A 1.125±0.00 N/A N/A N/A
ENSDART00000135150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142784 N/A N/A N/A 0.695±0.08 N/A N/A 2.297±0.55 N/A 0.131±0.00 N/A N/A N/A N/A N/A
ENSDART00000146305 N/A N/A N/A 2.705±1.20 N/A N/A 2.625±0.31 N/A 0.441±0.00 N/A 1.458±0.00 N/A N/A N/A
ENSDART00000147976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168259 ENST00000316603 39.139±0.00 49.712±0.00 N/A N/A 24.349±0.00 28.222±0.00 17.299±0.00 29.516±26.22 15.952±0.00 14.853±0.00 24.821±0.00 123.361±88.27 99.336±0.00 51.565±11.49
ENST00000426588 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.239±0.00 15.430±0.00 N/A N/A N/A
ENST00000457167 N/A N/A 4.476±0.00 9.864±0.00 7.781±0.00 10.064±4.47 8.244±4.17 3.243±0.00 5.737±0.00 5.468±0.00 3.063±0.00 30.472±10.09 17.880±2.29 N/A
ENST00000585693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 106.093±0.00 N/A 47.112±0.00
ENST00000587380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.365±0.00 N/A N/A
ENST00000589547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590197 0.653±0.00 1.585±0.00 0.537±0.00 0.671±0.49 0.809±0.28 0.398±0.05 0.270±0.11 0.341±0.26 0.190±0.03 0.790±0.24 0.105±0.00 1.430±0.68 0.343±0.22 1.047±0.30
ENST00000590348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173786 ENST00000393888 52.582±0.00 49.731±0.00 5.301±0.00 261.577±236.58 35.402±0.00 20.521±14.71 13.933±0.00 30.604±27.06 9.765±6.58 19.146±0.00 16.322±0.00 46.907±26.24 36.921±4.00 39.173±0.00
ENST00000393892 N/A N/A 1.377±0.00 63.240±50.22 N/A N/A N/A N/A 1.533±0.00 1.359±0.00 2.217±0.00 N/A N/A N/A
ENST00000441615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204815 ENST00000377540 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A 1.337±0.00 N/A 8.109±3.18
ENST00000585530 N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591658 N/A N/A N/A 0.079±0.00 0.024±0.00 N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A
ENST00000593239 N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 0.172±0.00 0.205±0.00 N/A N/A 0.182±0.00 N/A
ENST00000617460 N/A N/A N/A 0.784±0.00 0.152±0.00 N/A N/A 0.245±0.00 N/A 4.152±0.00 N/A 3.049±2.13 0.381±0.20 27.378±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006782 ENSMUST00000103120 20.735±4.04 28.706±3.82 23.397±2.08 51.046±0.00 33.397±11.04 23.831±1.56 N/A 9.898±1.45 10.413±1.70 24.203±0.92 9.029±0.00 28.320±3.16 N/A N/A
ENSMUST00000147403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000006784 ENSMUST00000006976 N/A N/A N/A N/A 0.272±0.00 0.074±0.00 0.094±0.04 0.136±0.00 N/A N/A 0.083±0.00 0.350±0.00 0.060±0.03 N/A
ENSMUST00000092684 0.311±0.10 N/A 0.112±0.01 0.281±0.12 0.214±0.00 0.140±0.04 0.064±0.00 0.276±0.07 0.031±0.01 0.491±0.12 0.114±0.07 1.986±1.79 0.101±0.04 66.552±72.12
ENSMUST00000127389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132143 0.259±0.18 0.492±0.25 0.026±0.01 0.281±0.16 0.435±0.18 0.209±0.02 0.091±0.03 0.235±0.00 0.026±0.01 0.909±0.11 0.044±0.02 0.661±0.19 0.156±0.12 N/A
ENSMUST00000150331 N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A
ENSMUSG00000014195 ENSMUST00000014339 N/A N/A 19.433±3.38 48.841±17.90 N/A N/A 13.962±0.00 8.318±0.39 23.373±5.22 N/A 25.235±5.45 36.565±2.78 28.978±20.87 43.006±2.37
ENSMUST00000128414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 77.188±9.09 N/A N/A
ENSMUST00000132886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136199 N/A N/A N/A 195.127±0.00 N/A N/A N/A N/A N/A N/A N/A 225.429±0.00 139.938±47.72 228.015±0.00
ENSMUST00000137688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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