C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA oxidase 2, branched chain
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168306 ACOX2 9606 - 3:58505136-58537319 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302819 ACOX2-001 58505136-58537319 protein_coding
  ENST00000459701 ACOX2-002 58505136-58537283 protein_coding
  ENST00000459888 ACOX2-011 58526505-58529206 retained_intron
  ENST00000460921 ACOX2-014 58505138-58517387 nonsense_mediated_decay
  ENST00000466689 ACOX2-006 58534118-58537175 retained_intron
  ENST00000466810 ACOX2-009 58531310-58533825 retained_intron
  ENST00000467738 ACOX2-012 58505136-58526749 retained_intron
  ENST00000474098 ACOX2-004 58533514-58537178 protein_coding
  ENST00000475143 ACOX2-007 58534058-58537172 processed_transcript
  ENST00000480791 ACOX2-005 58534577-58537147 retained_intron
  ENST00000481527 ACOX2-013 58505136-58522987 processed_transcript
  ENST00000489472 ACOX2-010 58524462-58533553 nonsense_mediated_decay
  ENST00000492530 ACOX2-008 58531321-58534979 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302819ENST00000459701ENST00000466689ENST00000466810ENST00000467738ENST00000474098ENST00000480791ENST00000481527ENST00000489472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302819 1.188±0.00 N/A 3.556±0.00 0.729±0.00 3.180±1.07 4.123±0.00 4.211±3.73 12.153±9.90 8.350±5.82 1.284±0.99 0.695±0.00 2.992±1.80 1.357±0.58 2.186±1.33
ENST00000459701 N/A 0.642±0.00 0.980±0.00 N/A 1.235±0.00 1.643±0.00 0.368±0.00 N/A N/A N/A 0.644±0.00 0.941±0.00 1.030±0.00 0.762±0.00
ENST00000466689 N/A 0.812±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.078±0.00 N/A N/A
ENST00000467738 N/A N/A N/A 0.124±0.00 N/A N/A N/A 11.276±0.00 19.297±0.00 0.857±0.00 N/A N/A N/A N/A
ENST00000474098 0.716±0.00 N/A N/A 0.426±0.22 N/A N/A N/A 21.976±0.00 N/A 1.778±0.00 2.481±0.00 N/A N/A N/A
ENST00000480791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.237±0.00
ENST00000481527 N/A N/A 14.385±0.00 N/A N/A N/A 2.822±0.00 21.018±16.78 21.124±0.00 N/A 3.568±0.00 3.856±0.52 1.233±0.00 2.217±0.00
ENST00000489472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AH CIL_0002AH_0001 CGP 3:58492114-58537319
CIL_0002AI CIL_0002AI_0001 CGP 3:58505136-58627610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 TAS:IEA acyl-CoA oxidase activity
GO:0005102 IPI receptor binding
GO:0005777 IDA:IEA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006631 IEA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006699 TAS bile acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0016402 TAS pristanoyl-CoA oxidase activity
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033791 IEA 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021751 Acox2 acyl-Coenzyme A oxidase 2, branched chain protein_coding Mus_musculus

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