C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA oxidase 2, branched chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302819 ACOX2-001 ENSG00000168306 9606 - 3:58505136-58537319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302819
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302819 1.188±0.00 3.556±0.00 0.729±0.00 3.180±1.07 4.123±0.00 4.211±3.73 12.153±9.90 8.350±5.82 1.284±0.99 0.695±0.00 2.992±1.80 1.357±0.58 2.186±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AH CIL_0002AH_0001 CGP 3:58492114-58537319
CIL_0002AI CIL_0002AI_0001 CGP 3:58505136-58627610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 TAS:IEA acyl-CoA oxidase activity
GO:0005102 IPI receptor binding
GO:0005777 IDA:IEA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006631 IEA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006699 TAS bile acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0016402 TAS pristanoyl-CoA oxidase activity
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033791 IEA 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164598 Acox2-001 protein_coding Mus_musculus 0 1570
ENSMUST00000022271 Acox2-002 protein_coding Mus_musculus 0 1570
ENSMUST00000170534 Acox2-004 protein_coding Mus_musculus 0 368
ENSMUST00000116361 Acox2-007 processed_transcript Mus_musculus 0 344
ENSMUST00000171567 Acox2-003 processed_transcript Mus_musculus 2e-28 132

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