C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major facilitator superfamily domain containing 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168389 MFSD2A 9606 + 1:39955112-39969968 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372809 MFSD2A-002 39955150-39969966 protein_coding
  ENST00000372811 MFSD2A-001 39955130-39969966 protein_coding
  ENST00000420632 MFSD2A-201 39955112-39969968 protein_coding
  ENST00000434861 MFSD2A-004 39955146-39966691 protein_coding
  ENST00000459917 MFSD2A-007 39967483-39968673 processed_transcript
  ENST00000469745 MFSD2A-005 39957821-39967169 processed_transcript
  ENST00000480630 MFSD2A-009 39964211-39969966 processed_transcript
  ENST00000481612 MFSD2A-008 39967619-39968614 processed_transcript
  ENST00000483824 MFSD2A-003 39955158-39969966 processed_transcript
  ENST00000491515 MFSD2A-006 39966662-39968692 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372811ENST00000420632ENST00000434861ENST00000459917ENST00000469745ENST00000480630ENST00000483824ENST00000491515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372811 0.243±0.00 0.599±0.00 N/A 5.974±3.06 0.609±0.47 1.171±0.00 0.326±0.00 7.511±0.47 67.642±0.00 6.987±2.60 N/A 0.759±0.51 21.461±16.56 12.806±4.04
ENST00000420632 N/A 0.511±0.00 0.077±0.00 N/A 0.364±0.00 N/A N/A 3.442±0.00 20.032±0.00 N/A 0.028±0.00 1.152±0.11 14.803±6.94 N/A
ENST00000434861 0.371±0.00 N/A N/A N/A 1.064±0.00 1.050±0.00 N/A N/A 0.215±0.00 N/A N/A 1.272±0.00 N/A N/A
ENST00000459917 N/A N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000469745 N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A 0.775±0.00 N/A N/A 1.697±0.00 N/A N/A
ENST00000480630 N/A N/A N/A N/A N/A 0.136±0.06 N/A N/A N/A N/A N/A 0.659±0.00 N/A N/A
ENST00000483824 N/A N/A N/A N/A N/A N/A N/A 2.546±0.00 0.076±0.00 N/A N/A 2.920±0.00 11.470±0.00 10.796±0.00
ENST00000491515 N/A 0.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JK CIL_0004JK_0003 CGP 1:39895426-39969968

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005548 ISS phospholipid transporter activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0015293 ISS symporter activity
GO:0015908 ISS fatty acid transport
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0045056 ISS transcytosis
GO:0055085 IEA transmembrane transport
GO:0060856 ISS establishment of blood-brain barrier
GO:1990379 ISS lipid transport across blood brain barrier

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030630 mfsd2aa major facilitator superfamily domain containing 2aa protein_coding Danio_rerio
ENSDARG00000035909 mfsd2ab major facilitator superfamily domain containing 2ab protein_coding Danio_rerio
ENSMUSG00000028655 Mfsd2a major facilitator superfamily domain containing 2A protein_coding Mus_musculus

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