C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major facilitator superfamily domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372811 MFSD2A-001 ENSG00000168389 9606 + 1:39955130-39969966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000372811
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000372811 0.243±0.00 0.599±0.00 5.974±3.06 0.609±0.47 1.171±0.00 0.326±0.00 7.511±0.47 67.642±0.00 6.987±2.60 0.759±0.51 21.461±16.56 12.806±4.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JK CIL_0004JK_0003 CGP 1:39895426-39969968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005548 ISS phospholipid transporter activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0015293 ISS symporter activity
GO:0015908 ISS fatty acid transport
GO:0016021 IEA integral component of membrane
GO:0045056 ISS transcytosis
GO:0055085 IEA transmembrane transport
GO:0060856 ISS establishment of blood-brain barrier
GO:1990379 ISS lipid transport across blood brain barrier

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030408 Mfsd2a-001 protein_coding Mus_musculus 0 1740
ENSMUST00000152308 Mfsd2a-002 processed_transcript Mus_musculus 0 974
ENSMUST00000127047 Mfsd2a-003 protein_coding Mus_musculus 0 407
ENSDART00000046115 mfsd2aa-001 protein_coding Danio_rerio 6e-28 130

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