C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hair growth associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168453 HR 9606 - 8:22114415-22133384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312841 HR-008 22114419-22131052 protein_coding
  ENST00000381418 HR-001 22114415-22131868 protein_coding
  ENST00000517699 HR-006 22120119-22122851 nonsense_mediated_decay
  ENST00000518377 HR-004 22130471-22133384 processed_transcript
  ENST00000518461 HR-007 22120843-22122690 retained_intron
  ENST00000519619 HR-005 22127486-22128116 processed_transcript
  ENST00000522016 HR-009 22115069-22118445 retained_intron
  ENST00000522039 HR-010 22118732-22119868 retained_intron
  ENST00000522759 HR-003 22128086-22130681 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000312841ENST00000381418ENST00000517699ENST00000518377ENST00000522016ENST00000522039ENST00000522759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000312841 0.485±0.00 0.349±0.00 0.065±0.00 6.735±0.00 1.463±1.03 2.527±0.00 0.139±0.00 0.061±0.03 0.445±0.00 0.110±0.00 0.717±0.46 0.379±0.17 2.681±0.12
ENST00000381418 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.282±0.00 N/A N/A
ENST00000517699 N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A
ENST00000518377 N/A N/A N/A N/A N/A N/A N/A N/A 0.839±0.00 N/A N/A N/A N/A
ENST00000522016 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.349±0.19 0.160±0.01 0.841±0.00
ENST00000522039 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A
ENST00000522759 N/A N/A N/A N/A N/A N/A 0.194±0.00 0.579±0.00 0.584±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0016491 IEA oxidoreductase activity
GO:0016604 IEA nuclear body
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022096 Hr hairless protein_coding Mus_musculus

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