C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hair growth associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312841 HR-008 ENSG00000168453 9606 - 8:22114419-22131052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000312841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000312841 0.485±0.00 0.349±0.00 0.065±0.00 6.735±0.00 1.463±1.03 2.527±0.00 0.139±0.00 0.061±0.03 0.445±0.00 0.110±0.00 0.717±0.46 0.379±0.17 2.681±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0016491 IEA oxidoreductase activity
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161069 Hr-002 protein_coding Mus_musculus 0 3326
ENSMUST00000022691 Hr-001 protein_coding Mus_musculus 0 3326
ENSMUST00000163060 Hr-003 protein_coding Mus_musculus 0 2656
ENSMUST00000159959 Hr-004 processed_transcript Mus_musculus 0 324
ENSMUST00000161468 Hr-005 processed_transcript Mus_musculus 0 250

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