C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168538 TRAPPC11 9606 + 4:183659267-183713594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334690 TRAPPC11-001 183659267-183713592 protein_coding
  ENST00000357207 TRAPPC11-201 183659267-183713594 protein_coding
  ENST00000504526 TRAPPC11-006 183659323-183666378 processed_transcript
  ENST00000505676 TRAPPC11-003 183659376-183713023 nonsense_mediated_decay
  ENST00000506426 TRAPPC11-010 183701660-183706940 retained_intron
  ENST00000509857 TRAPPC11-009 183664017-183674849 retained_intron
  ENST00000511409 TRAPPC11-008 183666956-183677538 processed_transcript
  ENST00000511955 TRAPPC11-005 183700853-183713591 retained_intron
  ENST00000512476 TRAPPC11-004 183683849-183712869 protein_coding
  ENST00000513600 TRAPPC11-007 183666893-183677475 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334690ENST00000357207ENST00000505676ENST00000509857ENST00000511955ENST00000512476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334690 4.376±0.00 0.589±0.00 0.638±0.00 2.843±0.12 4.448±1.09 2.306±0.63 2.344±1.24 1.066±0.00 2.069±0.68 2.700±0.58 1.224±0.69 4.288±2.41 2.045±0.78 3.601±0.00
ENST00000357207 N/A 0.510±0.00 N/A 2.236±0.63 N/A N/A N/A 2.165±0.00 N/A N/A N/A N/A 1.236±0.60 N/A
ENST00000505676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.344±0.00 N/A
ENST00000509857 N/A N/A 5.838±0.00 N/A N/A N/A 4.195±0.00 N/A N/A 14.375±0.00 8.216±0.00 N/A N/A N/A
ENST00000511955 N/A 1.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.480±0.00 N/A N/A
ENST00000512476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.994±0.00 3.011±0.00 2.826±0.00 5.525±3.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004726 trappc11 trafficking protein particle complex 11 protein_coding Danio_rerio
ENSMUSG00000038102 Trappc11 trafficking protein particle complex 11 protein_coding Mus_musculus

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