C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein particle complex 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038102 Trappc11 10090 - 8:47490115-47533470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039061 Trappc11-001 47490115-47533467 protein_coding
  ENSMUST00000120987 Trappc11-004 47504245-47511348 protein_coding
  ENSMUST00000123958 Trappc11-003 47490128-47525017 retained_intron
  ENSMUST00000125065 Trappc11-002 47490129-47533470 retained_intron
  ENSMUST00000131551 Trappc11-005 47524657-47528030 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039061ENSMUST00000123958ENSMUST00000125065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039061 10.507±3.13 7.567±2.32 11.503±1.41 11.317±2.45 8.617±2.38 8.976±1.65 5.809±0.61 11.563±2.32 7.784±1.75 10.848±1.87 5.718±0.54 9.632±2.48 11.750±2.74 6.946±2.46
ENSMUST00000123958 N/A N/A N/A N/A 2.764±0.00 N/A N/A N/A N/A N/A N/A 2.782±0.12 N/A N/A
ENSMUST00000125065 N/A 4.169±0.68 N/A 2.083±0.73 N/A N/A 0.683±0.00 N/A 1.119±0.14 3.075±0.00 0.608±0.00 2.410±0.18 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004726 trappc11 trafficking protein particle complex 11 protein_coding Danio_rerio
ENSG00000168538 TRAPPC11 trafficking protein particle complex 11 protein_coding Homo_sapiens

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