C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and ubiquitin-like domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168591 TMUB2 9606 + 17:44186970-44191731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319511 TMUB2-002 44187206-44191726 protein_coding
  ENST00000357984 TMUB2-201 44186986-44191730 protein_coding
  ENST00000446571 TMUB2-003 44186970-44191226 protein_coding
  ENST00000538716 TMUB2-001 44186990-44191698 protein_coding
  ENST00000587172 TMUB2-008 44188933-44191731 protein_coding
  ENST00000587326 TMUB2-007 44188851-44191725 nonsense_mediated_decay
  ENST00000587630 TMUB2-012 44189370-44191691 protein_coding
  ENST00000587775 TMUB2-014 44187932-44190553 nonsense_mediated_decay
  ENST00000587989 TMUB2-004 44187049-44191714 protein_coding
  ENST00000588413 TMUB2-013 44187234-44190721 nonsense_mediated_decay
  ENST00000589184 TMUB2-005 44187275-44191711 protein_coding
  ENST00000589785 TMUB2-009 44187262-44191712 protein_coding
  ENST00000589856 TMUB2-011 44187654-44190349 protein_coding
  ENST00000590235 TMUB2-006 44187050-44191731 protein_coding
  ENST00000592825 TMUB2-010 44187272-44191711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319511ENST00000357984ENST00000446571ENST00000538716ENST00000587172ENST00000587326ENST00000587630ENST00000587989ENST00000588413ENST00000589785ENST00000590235ENST00000592825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319511 4.819±0.00 2.797±0.00 N/A 0.860±0.00 2.542±0.00 N/A 2.073±1.85 0.420±0.00 0.974±0.09 1.784±0.00 0.139±0.00 5.975±0.67 6.095±0.06 6.239±0.00
ENST00000357984 4.503±0.00 4.275±0.00 N/A N/A 4.743±0.00 4.424±0.00 N/A 4.819±0.00 2.752±0.00 5.442±0.00 2.009±0.00 4.085±0.00 N/A 6.028±0.00
ENST00000446571 N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A 3.431±0.00 3.718±0.00 N/A
ENST00000538716 N/A N/A N/A N/A 3.174±0.00 N/A N/A N/A N/A 2.311±0.00 N/A 4.239±0.26 4.214±0.00 N/A
ENST00000587172 N/A N/A N/A N/A N/A N/A N/A 5.299±0.00 N/A 5.864±0.00 N/A N/A N/A N/A
ENST00000587326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.708±0.00 N/A
ENST00000587630 N/A N/A N/A N/A N/A N/A N/A N/A 1.720±0.00 N/A 2.177±0.00 7.127±1.40 6.770±0.00 N/A
ENST00000587989 N/A N/A N/A 0.509±0.00 N/A 0.663±0.00 N/A N/A N/A 1.199±0.00 N/A N/A N/A N/A
ENST00000588413 N/A N/A 0.630±0.00 N/A N/A N/A N/A 1.675±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589785 6.181±0.00 4.760±0.00 N/A N/A 3.594±0.00 8.193±0.00 3.266±0.00 4.216±0.00 1.051±0.00 N/A 3.424±0.00 6.065±0.72 7.304±0.69 6.878±0.00
ENST00000590235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.727±0.00 N/A N/A N/A
ENST00000592825 N/A 3.100±0.00 N/A N/A 0.370±0.00 N/A N/A 1.534±1.37 N/A N/A N/A 5.599±0.92 4.513±1.21 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0000KZ CIL_0000KZ_0002 CGP 17:44170447-44191731
CIL_0003L7 CIL_0003L7_0002 CGP 17:44186970-44200113

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056467 tmub2 transmembrane and ubiquitin-like domain containing 2 protein_coding Danio_rerio
ENSMUSG00000034757 Tmub2 transmembrane and ubiquitin-like domain containing 2 protein_coding Mus_musculus

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