C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003L7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056467-ENSDARG00000029331 CGP 7955 3:19900116-19929921
GeneTranscriptPositionBiotype
ENSDARG00000029331 (atxn7l3)
ataxin 7-like 3 		ENSDART00000104118 (atxn7l3-201) 19914994-19929921 protein_coding
ENSDARG00000056467 (tmub2)
transmembrane and ubiquitin-like domain containing 2 		ENSDART00000078974 (tmub2-201) 19900116-19908821 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003L7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168591-ENSG00000087152 CGP 9606 17:44186970-44200113
GeneTranscriptPositionBiotype
ENSG00000087152 (ATXN7L3)
ataxin 7-like 3 		ENST00000389384 (ATXN7L3-001) 44191805-44198379 protein_coding
ENST00000454077 (ATXN7L3-003) 44191805-44198070 protein_coding
ENST00000586688 (ATXN7L3-010) 44194371-44195293 retained_intron
ENST00000587022 (ATXN7L3-005) 44195121-44196213 retained_intron
ENST00000587097 (ATXN7L3-002) 44194383-44199852 protein_coding
ENST00000589607 (ATXN7L3-007) 44194651-44196163 retained_intron
ENST00000589805 (ATXN7L3-011) 44196964-44199206 protein_coding
ENST00000590169 (ATXN7L3-004) 44196941-44198511 protein_coding
ENST00000590537 (ATXN7L3-006) 44194540-44196166 protein_coding
ENST00000591295 (ATXN7L3-009) 44191805-44196053 protein_coding
ENST00000591807 (ATXN7L3-008) 44194657-44195476 retained_intron
ENST00000593073 (ATXN7L3-012) 44194240-44200113 processed_transcript
ENSG00000168591 (TMUB2)
transmembrane and ubiquitin-like domain containing 2 		ENST00000319511 (TMUB2-002) 44187206-44191726 protein_coding
ENST00000357984 (TMUB2-201) 44186986-44191730 protein_coding
ENST00000446571 (TMUB2-003) 44186970-44191226 protein_coding
ENST00000538716 (TMUB2-001) 44186990-44191698 protein_coding
ENST00000587172 (TMUB2-008) 44188933-44191731 protein_coding
ENST00000587326 (TMUB2-007) 44188851-44191725 nonsense_mediated_decay
ENST00000587630 (TMUB2-012) 44189370-44191691 protein_coding
ENST00000587775 (TMUB2-014) 44187932-44190553 nonsense_mediated_decay
ENST00000587989 (TMUB2-004) 44187049-44191714 protein_coding
ENST00000588413 (TMUB2-013) 44187234-44190721 nonsense_mediated_decay
ENST00000589184 (TMUB2-005) 44187275-44191711 protein_coding
ENST00000589785 (TMUB2-009) 44187262-44191712 protein_coding
ENST00000589856 (TMUB2-011) 44187654-44190349 protein_coding
ENST00000590235 (TMUB2-006) 44187050-44191731 protein_coding
ENST00000592825 (TMUB2-010) 44187272-44191711 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003L7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034757-ENSMUSG00000059995 CGP 10090 11:102284931-102296631
GeneTranscriptPositionBiotype
ENSMUSG00000034757 (Tmub2)
transmembrane and ubiquitin-like domain containing 2 		ENSMUST00000036376 (Tmub2-002) 102284931-102289237 protein_coding
ENSMUST00000100387 (Tmub2-001) 102284939-102289237 protein_coding
ENSMUST00000135551 (Tmub2-004) 102284939-102288211 processed_transcript
ENSMUST00000156077 (Tmub2-005) 102284951-102287391 processed_transcript
ENSMUST00000156326 (Tmub2-003) 102285196-102289237 protein_coding
ENSMUSG00000059995 (Atxn7l3)
ataxin 7-like 3 		ENSMUST00000073234 (Atxn7l3-001) 102289300-102296631 protein_coding
ENSMUST00000107132 (Atxn7l3-201) 102289301-102296629 protein_coding
ENSMUST00000107134 (Atxn7l3-002) 102289300-102295312 protein_coding
ENSMUST00000137387 (Atxn7l3-003) 102289300-102294987 protein_coding
ENSMUST00000141516 (Atxn7l3-005) 102289300-102294163 protein_coding
ENSMUST00000145484 (Atxn7l3-004) 102289300-102293444 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003L7_0001ENSDARG00000029331ENSDART00000104118ENSDARG00000056467ENSDART00000078974CIL_0003L7_0002ENSG00000087152ENST00000389384ENST00000454077ENST00000586688ENST00000587022ENST00000587097ENST00000589607ENST00000589805ENST00000590169ENST00000590537ENST00000591295ENST00000591807ENST00000593073ENSG00000168591ENST00000319511ENST00000357984ENST00000446571ENST00000538716ENST00000587172ENST00000587326ENST00000587630ENST00000587775ENST00000587989ENST00000588413ENST00000589184ENST00000589785ENST00000589856ENST00000590235ENST00000592825CIL_0003L7_0003ENSMUSG00000034757ENSMUST00000036376ENSMUST00000100387ENSMUST00000135551ENSMUST00000156077ENSMUST00000156326ENSMUSG00000059995ENSMUST00000073234ENSMUST00000107132ENSMUST00000107134ENSMUST00000137387ENSMUST00000141516ENSMUST00000145484
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003L7_0001ENSDARG00000029331ENSDART00000104118ENSDARG00000056467ENSDART00000078974CIL_0003L7_0002ENSG00000087152ENST00000389384ENST00000454077ENST00000587097ENST00000589805ENST00000590169ENST00000591295ENST00000593073ENSG00000168591ENST00000319511ENST00000357984ENST00000446571ENST00000538716ENST00000587172ENST00000587326ENST00000587630ENST00000587989ENST00000588413ENST00000589785ENST00000590235ENST00000592825CIL_0003L7_0003ENSMUSG00000034757ENSMUST00000036376ENSMUST00000100387ENSMUST00000156077ENSMUST00000156326ENSMUSG00000059995ENSMUST00000073234ENSMUST00000107132ENSMUST00000107134ENSMUST00000137387ENSMUST00000141516ENSMUST00000145484
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000029331 ENSDART00000104118 N/A N/A N/A 12.520±8.67 N/A N/A 2.157±1.72 1.483±1.51 0.769±0.00 N/A 2.139±0.00 N/A N/A N/A
ENSDARG00000056467 ENSDART00000078974 N/A N/A N/A 15.907±0.00 N/A N/A 9.391±0.17 N/A 4.220±0.00 N/A 15.153±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087152 ENST00000389384 2.388±0.00 4.321±0.00 0.276±0.00 0.850±0.00 2.200±0.00 3.399±0.00 N/A N/A N/A 3.189±2.44 N/A 11.668±10.94 7.725±1.24 12.999±8.36
ENST00000454077 9.651±0.00 4.042±0.00 0.587±0.00 15.590±10.53 2.657±2.05 4.780±0.00 3.864±3.48 1.345±0.00 2.511±1.16 3.870±0.00 0.397±0.00 7.506±5.78 8.495±3.29 10.471±0.00
ENST00000586688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587097 N/A N/A N/A 4.394±0.00 2.577±0.00 1.979±0.00 0.583±0.00 N/A 1.421±0.00 1.026±0.00 1.087±0.00 3.755±0.00 9.069±0.00 N/A
ENST00000589607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.870±0.00 N/A 25.086±0.00 95.224±0.00
ENST00000590169 N/A N/A 3.251±0.00 7.260±0.00 N/A 4.503±0.00 N/A 2.767±0.00 3.992±0.00 1.997±0.00 N/A 57.306±50.14 N/A 80.557±0.00
ENST00000590537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591295 N/A 7.169±0.00 N/A N/A 2.141±0.00 3.180±0.00 N/A N/A 3.067±0.00 5.719±0.00 N/A 8.271±0.00 7.170±0.76 4.460±0.00
ENST00000591807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593073 N/A N/A 1.812±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168591 ENST00000319511 4.819±0.00 2.797±0.00 N/A 0.860±0.00 2.542±0.00 N/A 2.073±1.85 0.420±0.00 0.974±0.09 1.784±0.00 0.139±0.00 5.975±0.67 6.095±0.06 6.239±0.00
ENST00000357984 4.503±0.00 4.275±0.00 N/A N/A 4.743±0.00 4.424±0.00 N/A 4.819±0.00 2.752±0.00 5.442±0.00 2.009±0.00 4.085±0.00 N/A 6.028±0.00
ENST00000446571 N/A N/A N/A N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A 3.431±0.00 3.718±0.00 N/A
ENST00000538716 N/A N/A N/A N/A 3.174±0.00 N/A N/A N/A N/A 2.311±0.00 N/A 4.239±0.26 4.214±0.00 N/A
ENST00000587172 N/A N/A N/A N/A N/A N/A N/A 5.299±0.00 N/A 5.864±0.00 N/A N/A N/A N/A
ENST00000587326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.708±0.00 N/A
ENST00000587630 N/A N/A N/A N/A N/A N/A N/A N/A 1.720±0.00 N/A 2.177±0.00 7.127±1.40 6.770±0.00 N/A
ENST00000587775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587989 N/A N/A N/A 0.509±0.00 N/A 0.663±0.00 N/A N/A N/A 1.199±0.00 N/A N/A N/A N/A
ENST00000588413 N/A N/A 0.630±0.00 N/A N/A N/A N/A 1.675±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589785 6.181±0.00 4.760±0.00 N/A N/A 3.594±0.00 8.193±0.00 3.266±0.00 4.216±0.00 1.051±0.00 N/A 3.424±0.00 6.065±0.72 7.304±0.69 6.878±0.00
ENST00000589856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.727±0.00 N/A N/A N/A
ENST00000592825 N/A 3.100±0.00 N/A N/A 0.370±0.00 N/A N/A 1.534±1.37 N/A N/A N/A 5.599±0.92 4.513±1.21 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034757 ENSMUST00000036376 8.809±0.60 6.361±2.04 12.357±2.06 10.337±5.26 6.972±2.18 8.036±2.72 4.097±0.90 8.807±1.47 8.075±3.06 7.985±1.33 5.757±1.55 9.753±5.52 8.171±3.25 7.207±3.45
ENSMUST00000100387 5.953±1.25 11.455±2.81 6.929±0.15 6.261±2.99 6.768±2.13 7.208±0.68 4.946±0.87 11.871±2.18 6.287±2.97 5.690±2.08 N/A 7.140±1.14 10.002±4.99 2.355±1.45
ENSMUST00000135551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.732±0.00 14.671±0.46 23.143±0.00
ENSMUST00000156326 6.508±0.42 11.520±1.67 5.849±0.35 10.890±5.98 7.587±3.62 7.041±0.81 2.520±0.33 3.878±0.61 3.309±0.96 5.250±0.98 2.098±0.57 5.101±1.36 3.549±2.43 3.609±0.30
ENSMUSG00000059995 ENSMUST00000073234 4.196±0.80 N/A 6.063±0.13 26.316±14.43 2.345±0.21 6.646±1.25 3.053±1.27 2.663±0.91 3.489±1.99 2.824±0.17 3.202±1.19 6.706±4.75 12.118±8.43 2.864±1.02
ENSMUST00000107132 N/A N/A N/A N/A N/A 4.564±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107134 2.133±0.26 N/A 2.973±1.03 N/A N/A N/A N/A N/A 2.230±0.00 N/A N/A 8.699±2.68 1.560±0.00 N/A
ENSMUST00000137387 5.533±0.99 5.183±0.41 5.610±1.00 22.178±1.24 5.562±1.29 6.355±2.16 3.060±1.43 4.740±2.44 3.652±1.27 7.951±1.01 1.091±0.36 7.940±2.16 6.176±2.90 3.149±1.69
ENSMUST00000141516 N/A 12.419±4.15 2.498±0.00 11.704±0.02 N/A 6.631±4.20 1.172±0.29 2.401±0.00 2.433±0.54 N/A 1.533±0.46 3.735±0.00 1.630±0.00 N/A
ENSMUST00000145484 4.158±1.38 10.751±0.45 N/A N/A 10.295±5.42 6.144±2.03 1.806±0.00 2.166±0.24 N/A 6.026±2.20 1.327±0.00 11.841±4.11 N/A N/A

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