C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 181
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168894 RNF181 9606 + 2:85595725-85597613 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306368 RNF181-001 85595734-85597581 protein_coding
  ENST00000414390 RNF181-006 85595748-85596820 protein_coding
  ENST00000441634 RNF181-005 85595725-85597581 protein_coding
  ENST00000443647 RNF181-003 85595756-85597604 nonsense_mediated_decay
  ENST00000456023 RNF181-004 85595817-85597613 protein_coding
  ENST00000461845 RNF181-002 85595725-85597016 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306368ENST00000414390ENST00000443647ENST00000456023ENST00000461845
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306368 56.299±0.00 56.629±0.00 4.502±0.00 26.840±13.41 32.839±28.58 23.936±18.70 18.221±11.89 40.622±29.39 38.854±28.92 49.135±43.21 24.468±21.85 36.694±22.38 84.304±33.51 47.027±21.18
ENST00000414390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.445±0.00 N/A 32.303±0.00
ENST00000443647 N/A 10.663±0.00 N/A N/A N/A N/A 4.955±0.00 1.863±0.00 8.927±0.00 18.613±0.00 12.137±9.75 10.581±0.00 N/A 7.476±0.00
ENST00000456023 N/A N/A 1.782±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.137±0.00 N/A N/A
ENST00000461845 N/A N/A N/A N/A N/A N/A N/A 1.819±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0001 VISTA 2:85469895-86073896
CIL_00084P CIL_00084P_0001 VISTA 2:85470344-86073882

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023958 rnf181 ring finger protein 181 protein_coding Danio_rerio
ENSMUSG00000055850 Rnf181 ring finger protein 181 protein_coding Mus_musculus

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