C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactoside-binding, soluble, 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168961 LGALS9 9606 + 17:27629798-27649560 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302228 LGALS9-002 27629798-27649560 protein_coding
  ENST00000313648 LGALS9-005 27631148-27649433 protein_coding
  ENST00000395473 LGALS9-001 27629798-27649560 protein_coding
  ENST00000448970 LGALS9-004 27631209-27641023 processed_transcript
  ENST00000467111 LGALS9-003 27631214-27649541 nonsense_mediated_decay
  ENST00000481514 LGALS9-007 27644065-27649554 retained_intron
  ENST00000486774 LGALS9-006 27644126-27649555 retained_intron
  ENST00000577392 LGALS9-010 27631193-27647110 protein_coding
  ENST00000578944 LGALS9-016 27643540-27647383 protein_coding
  ENST00000579402 LGALS9-009 27631211-27638724 retained_intron
  ENST00000579930 LGALS9-011 27631188-27642423 retained_intron
  ENST00000580779 LGALS9-008 27631167-27647334 nonsense_mediated_decay
  ENST00000581710 LGALS9-014 27640734-27649256 protein_coding
  ENST00000583671 LGALS9-012 27640387-27643581 retained_intron
  ENST00000584386 LGALS9-013 27631226-27647164 retained_intron
  ENST00000584661 LGALS9-015 27631195-27645899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000313648ENST00000448970ENST00000467111ENST00000481514
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000313648 N/A N/A N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A N/A
ENST00000448970 N/A N/A 21.570±0.00 25.708±0.00 1.484±0.00 5.604±0.00 N/A 16.774±0.00 N/A N/A N/A
ENST00000467111 14.271±0.00 55.533±0.00 19.212±0.00 17.101±0.00 5.046±0.00 1.284±0.00 3.764±0.00 32.444±0.00 16.323±1.31 31.990±4.37 11.933±0.00
ENST00000481514 N/A N/A N/A 3.287±0.00 N/A 0.738±0.00 N/A 2.639±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0005534 TAS galactose binding
GO:0005737 IEA cytoplasm
GO:0007165 IMP signal transduction
GO:0030246 IDA:IEA carbohydrate binding
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025903 lgals9l1 lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 protein_coding Danio_rerio
ENSDARG00000041060 zgc:92326 zgc:92326 protein_coding Danio_rerio
ENSDARG00000069058 zgc:136924 zgc:136924 protein_coding Danio_rerio
ENSDARG00000087311 zgc:171951 zgc:171951 protein_coding Danio_rerio
ENSDARG00000093059 si:ch211-209m20.9 si:ch211-209m20.9 protein_coding Danio_rerio
ENSMUSG00000001123 Lgals9 lectin, galactose binding, soluble 9 protein_coding Mus_musculus

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