C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactose binding, soluble 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001123 Lgals9 10090 - 11:78962974-78984946 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073001 Lgals9-002 78963395-78984831 protein_coding
  ENSMUST00000108268 Lgals9-001 78962974-78984946 protein_coding
  ENSMUST00000108269 Lgals9-201 78962979-78984924 protein_coding
  ENSMUST00000140073 Lgals9-003 78966881-78970330 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073001ENSMUST00000108268ENSMUST00000108269
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073001 N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 63.421±36.77 0.338±0.00
ENSMUST00000108268 79.175±8.32 25.283±2.60 33.589±1.40 1.894±0.87 78.766±20.98 32.724±8.17 21.558±3.21 24.974±0.82 328.029±230.32 84.822±8.16 4.342±0.84 36.770±12.08 336.806±199.70 2.005±1.00
ENSMUST00000108269 N/A N/A N/A N/A N/A 25.476±2.70 N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0002 VISTA 11:78750979-79355443
CIL_0006M1 CIL_0006M1_0002 CGP 11:78962974-79146407

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0007157 ISA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016936 ISA galactoside binding
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025903 lgals9l1 lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 protein_coding Danio_rerio
ENSDARG00000041060 zgc:92326 zgc:92326 protein_coding Danio_rerio
ENSDARG00000069058 zgc:136924 zgc:136924 protein_coding Danio_rerio
ENSDARG00000087311 zgc:171951 zgc:171951 protein_coding Danio_rerio
ENSDARG00000093059 si:ch211-209m20.9 si:ch211-209m20.9 protein_coding Danio_rerio
ENSG00000168961 LGALS9 lectin, galactoside-binding, soluble, 9 protein_coding Homo_sapiens
ENSG00000170298 LGALS9B lectin, galactoside-binding, soluble, 9B protein_coding Homo_sapiens
ENSG00000171916 LGALS9C lectin, galactoside-binding, soluble, 9C protein_coding Homo_sapiens

Loading