C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: JMJD7-PLA2G4B readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168970 JMJD7-PLA2G4B 9606 + 15:41828095-41848155 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342159 JMJD7-PLA2G4B-002 41828117-41847966 protein_coding
  ENST00000382448 JMJD7-PLA2G4B-001 41828116-41848143 protein_coding
  ENST00000458483 JMJD7-PLA2G4B-201 41838813-41848147 protein_coding
  ENST00000476036 JMJD7-PLA2G4B-003 41835046-41840230 processed_transcript
  ENST00000487292 JMJD7-PLA2G4B-006 41836785-41848143 nonsense_mediated_decay
  ENST00000490848 JMJD7-PLA2G4B-005 41828095-41848155 retained_intron
  ENST00000491746 JMJD7-PLA2G4B-004 41828116-41848143 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungOvaryTestisENST00000487292ENST00000490848
Transcript ID Brain Breast Lung Ovary Testis
ENST00000487292 0.722±0.00 N/A N/A N/A N/A
ENST00000490848 1.075±0.00 0.743±0.00 1.444±0.00 2.516±1.78 2.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F8 CIL_0005F8_0001 CGP 15:41828085-41848155
CIL_0005F2 CIL_0005F2_0001 CGP 15:41828095-41848155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004620 IEA phospholipase activity
GO:0004622 NAS lysophospholipase activity
GO:0005509 NAS calcium ion binding
GO:0005515 IEA protein binding
GO:0005544 NAS calcium-dependent phospholipid binding
GO:0005576 TAS extracellular region
GO:0005743 TAS mitochondrial inner membrane
GO:0005768 IEA endosome
GO:0005829 IDA cytosol
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0006954 NAS inflammatory response
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0007567 NAS parturition
GO:0008152 IEA metabolic process
GO:0009395 IEA phospholipid catabolic process
GO:0019369 NAS arachidonic acid metabolic process
GO:0019722 NAS calcium-mediated signaling
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0036150 TAS phosphatidylserine acyl-chain remodeling
GO:0036151 TAS phosphatidylcholine acyl-chain remodeling
GO:0036152 TAS phosphatidylethanolamine acyl-chain remodeling
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0046475 IDA glycerophospholipid catabolic process
GO:0047498 IDA calcium-dependent phospholipase A2 activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033852 Gm28042 predicted gene, 28042 protein_coding Mus_musculus
ENSMUSG00000098488 Pla2g4b phospholipase A2, group IVB (cytosolic) protein_coding Mus_musculus

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