C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene, 28042
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033852 Gm28042 10090 + 2:120027493-120043033 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125805 Gm28042-005 120031848-120034993 nonsense_mediated_decay
  ENSMUST00000129685 Gm28042-001 120027504-120043033 protein_coding
  ENSMUST00000156805 Gm28042-002 120027507-120041595 protein_coding
  ENSMUST00000162393 Gm28042-003 120027493-120043033 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125805ENSMUST00000129685ENSMUST00000162393
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.270±0.00 N/A
ENSMUST00000129685 0.748±0.00 1.162±0.35 0.762±0.00 4.338±0.00 0.712±0.09 1.102±0.18 0.463±0.00 0.420±0.07 0.443±0.05 N/A N/A 1.488±0.36 0.782±0.30 0.775±0.16
ENSMUST00000162393 0.958±0.36 1.152±0.32 1.005±0.20 6.526±1.86 0.908±0.20 1.140±0.32 0.794±0.01 0.544±0.21 0.740±0.40 0.709±0.17 0.461±0.13 2.691±0.98 0.548±0.02 1.175±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F8 CIL_0005F8_0002 CGP 2:120027483-120043033
CIL_0005F2 CIL_0005F2_0002 CGP 2:120027493-120043033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004620 IEA phospholipase activity
GO:0009395 IEA phospholipid catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168970 JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough protein_coding Homo_sapiens
ENSG00000243708 PLA2G4B phospholipase A2, group IVB (cytosolic) protein_coding Homo_sapiens

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