C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168995 SIGLEC7 9606 + 19:51142299-51153526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305628 SIGLEC7-001 51142307-51153526 protein_coding
  ENST00000317643 SIGLEC7-002 51142301-51153526 protein_coding
  ENST00000536156 SIGLEC7-003 51142370-51153245 nonsense_mediated_decay
  ENST00000599250 SIGLEC7-006 51146957-51153228 retained_intron
  ENST00000600577 SIGLEC7-004 51142370-51153245 protein_coding
  ENST00000601682 SIGLEC7-005 51142299-51144920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000305628ENST00000317643ENST00000536156ENST00000599250ENST00000601682
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000305628 N/A N/A N/A N/A 0.072±0.00 N/A 0.080±0.00 N/A N/A 0.135±0.05 N/A N/A
ENST00000317643 0.552±0.00 1.365±0.00 0.372±0.00 0.214±0.00 N/A 0.170±0.00 0.232±0.06 1.292±0.00 1.653±0.00 0.113±0.03 1.632±0.63 0.198±0.00
ENST00000536156 N/A N/A N/A N/A 0.108±0.00 N/A 1.354±0.00 N/A 0.667±0.00 N/A N/A N/A
ENST00000599250 N/A N/A N/A 0.514±0.00 N/A N/A N/A N/A N/A N/A 1.412±0.00 N/A
ENST00000601682 N/A N/A 0.113±0.00 N/A 0.132±0.00 N/A N/A 0.544±0.00 N/A 0.288±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089404 SIGLEC8 sialic acid binding Ig-like lectin 8 protein_coding Danio_rerio
ENSMUSG00000030474 Siglece sialic acid binding Ig-like lectin E protein_coding Mus_musculus

Loading