C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317643 SIGLEC7-002 ENSG00000168995 9606 + 19:51142301-51153526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000317643
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000317643 0.552±0.00 1.365±0.00 0.372±0.00 0.214±0.00 0.170±0.00 0.232±0.06 1.292±0.00 1.653±0.00 0.113±0.03 1.632±0.63 0.198±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121494 Siglec5-004 protein_coding Mus_musculus 5e-23 113
ENSMUST00000122423 Siglec5-003 protein_coding Mus_musculus 5e-23 113
ENSMUST00000012798 Siglec5-001 protein_coding Mus_musculus 5e-23 113
ENSMUST00000145867 Siglec5-002 retained_intron Mus_musculus 5e-23 113

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