C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, mannose-binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169223 LMAN2 9606 - 5:177331562-177351852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303127 LMAN2-001 177331562-177351852 protein_coding
  ENST00000502560 LMAN2-005 177334309-177351659 protein_coding
  ENST00000502721 LMAN2-003 177336911-177338544 retained_intron
  ENST00000504071 LMAN2-006 177331954-177334552 retained_intron
  ENST00000506310 LMAN2-004 177337435-177351667 processed_transcript
  ENST00000513877 LMAN2-002 177337138-177351522 protein_coding
  ENST00000514458 LMAN2-007 177332202-177351652 protein_coding
  ENST00000515209 LMAN2-008 177332031-177351647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303127ENST00000502560ENST00000506310ENST00000514458ENST00000515209
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303127 32.861±0.00 44.938±0.00 1.514±0.00 6.005±3.35 13.622±6.36 22.040±0.00 5.682±2.87 39.996±17.07 40.171±33.22 21.236±0.00 7.801±5.49 52.867±8.92 112.895±2.49 52.658±2.32
ENST00000502560 N/A N/A 3.761±0.00 14.782±0.00 17.137±0.00 22.384±0.00 3.785±0.00 22.784±0.00 12.910±0.00 15.901±0.00 4.230±0.00 42.199±22.71 121.099±0.00 129.310±0.00
ENST00000506310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 58.033±0.00 N/A N/A
ENST00000514458 24.898±0.00 31.694±0.00 N/A 9.138±0.00 14.733±0.00 31.210±0.00 N/A N/A N/A N/A N/A N/A N/A 45.725±0.00
ENST00000515209 10.307±0.00 N/A 6.962±0.00 4.519±0.00 12.346±1.89 11.652±2.72 12.616±6.63 35.310±7.76 51.653±47.90 27.839±16.98 24.206±0.00 26.068±13.47 68.124±1.76 35.354±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YL CIL_0002YL_0001 CGP 5:177331562-177372601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001948 IPI glycoprotein binding
GO:0005537 IMP mannose binding
GO:0005615 IDA extracellular space
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005887 IDA integral component of plasma membrane
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0009986 IDA cell surface
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030246 IDA carbohydrate binding
GO:0031072 IPI heat shock protein binding
GO:0046872 IEA metal ion binding
GO:0050766 IMP positive regulation of phagocytosis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061854 lman2 lectin, mannose-binding 2 protein_coding Danio_rerio
ENSMUSG00000021484 Lman2 lectin, mannose-binding 2 protein_coding Mus_musculus

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