C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303127 LMAN2-001 ENSG00000169223 9606 - 5:177331562-177351852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303127
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303127 32.861±0.00 44.938±0.00 1.514±0.00 6.005±3.35 13.622±6.36 22.040±0.00 5.682±2.87 39.996±17.07 40.171±33.22 21.236±0.00 7.801±5.49 52.867±8.92 112.895±2.49 52.658±2.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YL CIL_0002YL_0001 CGP 5:177331562-177372601

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IPI glycoprotein binding
GO:0005537 IMP mannose binding
GO:0005615 IDA extracellular space
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005887 IDA integral component of plasma membrane
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0009986 IDA cell surface
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030246 IDA carbohydrate binding
GO:0031072 IPI heat shock protein binding
GO:0046872 IEA metal ion binding
GO:0050766 IMP positive regulation of phagocytosis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021940 Lman2-201 protein_coding Mus_musculus 0 1517

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