C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uromodulin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169344 UMOD 9606 - 16:20333052-20356301 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302509 UMOD-201 20333052-20352878 protein_coding
  ENST00000396134 UMOD-002 20333052-20352710 protein_coding
  ENST00000396138 UMOD-001 20333052-20352800 protein_coding
  ENST00000570331 UMOD-019 20333339-20342509 processed_transcript
  ENST00000570689 UMOD-008 20333069-20356301 protein_coding
  ENST00000570757 UMOD-014 20349036-20352711 protein_coding
  ENST00000570972 UMOD-015 20350650-20351438 protein_coding
  ENST00000571174 UMOD-011 20348925-20352715 protein_coding
  ENST00000573567 UMOD-018 20348886-20352710 protein_coding
  ENST00000574195 UMOD-017 20348980-20351171 protein_coding
  ENST00000576546 UMOD-016 20349043-20351312 protein_coding
  ENST00000576688 UMOD-012 20348993-20352715 protein_coding
  ENST00000577168 UMOD-009 20348971-20352878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLungMuscleOvaryTestisENST00000396134ENST00000396138ENST00000570331ENST00000570689ENST00000573567ENST00000576688
Transcript ID Adrenal Bladder Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000396134 N/A N/A N/A N/A 259.134±0.00 N/A N/A N/A 0.281±0.00
ENST00000396138 N/A 73.169±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000570331 0.032±0.00 N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A
ENST00000570689 N/A 97.557±0.00 0.014±0.00 0.024±0.00 1539.430±0.00 N/A 0.044±0.00 0.012±0.00 0.046±0.00
ENST00000573567 N/A N/A 0.042±0.00 0.031±0.00 N/A N/A N/A N/A 0.058±0.00
ENST00000576688 N/A 129.061±0.00 N/A N/A N/A N/A 0.135±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FE CIL_0007FE_000G CGP 16:20309572-20356301
CIL_00028L CIL_00028L_0001 CGP 16:20333052-20404737

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0006968 TAS cellular defense response
GO:0007157 IDA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IDA leukocyte cell-cell adhesion
GO:0007588 IEA excretion
GO:0008285 TAS negative regulation of cell proliferation
GO:0010033 IEA response to organic substance
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0019864 IDA IgG binding
GO:0019898 TAS extrinsic component of membrane
GO:0031225 IDA anchored component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0045121 IEA membrane raft
GO:0045177 IEA apical part of cell
GO:0048878 IEA chemical homeostasis
GO:0070062 IDA extracellular vesicular exosome
GO:0072218 IEA metanephric ascending thin limb development
GO:0072221 IEA metanephric distal convoluted tubule development
GO:0072233 IEA metanephric thick ascending limb development
GO:0072372 IDA primary cilium
GO:1990266 IDA neutrophil migration
GO:2000021 IEA regulation of ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052779 zgc:153932 zgc:153932 protein_coding Danio_rerio
ENSDARG00000074150 si:ch211-226h7.5 si:ch211-226h7.5 protein_coding Danio_rerio
ENSDARG00000074642 BX072532.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000074683 CABZ01048960.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000076196 si:ch211-226h7.6 si:ch211-226h7.6 protein_coding Danio_rerio
ENSDARG00000078617 CABZ01048958.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000079628 si:ch73-338o16.4 si:ch73-338o16.4 protein_coding Danio_rerio
ENSDARG00000086117 si:dkey-9c18.13 si:dkey-9c18.13 protein_coding Danio_rerio
ENSDARG00000088671 CABZ01078124.1 protein_coding Danio_rerio
ENSDARG00000088732 BX284640.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088794 si:ch73-180n10.1 si:ch73-180n10.1 protein_coding Danio_rerio
ENSDARG00000089465 CABZ01048956.1 protein_coding Danio_rerio
ENSDARG00000090161 CABZ01076078.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092250 BX072532.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092704 BX072532.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092778 BX072532.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093101 BX005305.7 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093365 si:ch211-226h7.3 si:ch211-226h7.3 protein_coding Danio_rerio
ENSDARG00000094570 si:ch211-226h7.2 si:ch211-226h7.2 protein_coding Danio_rerio
ENSDARG00000094951 BX072532.5 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095409 si:ch211-226h7.8 si:ch211-226h7.8 protein_coding Danio_rerio
ENSDARG00000097080 si:ch73-181m17.1 si:ch73-181m17.1 protein_coding Danio_rerio
ENSDARG00000097826 si:dkey-239b22.2 si:dkey-239b22.2 protein_coding Danio_rerio
ENSMUSG00000030963 Umod uromodulin protein_coding Mus_musculus

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