C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uromodulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570689 UMOD-008 ENSG00000169344 9606 - 16:20333069-20356301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyMuscleOvaryTestisENST00000570689
Transcript ID Bladder Breast Colon Kidney Muscle Ovary Testis
ENST00000570689 97.557±0.00 0.014±0.00 0.024±0.00 1539.430±0.00 0.044±0.00 0.012±0.00 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FE CIL_0007FE_000G CGP 16:20309572-20356301
CIL_00028L CIL_00028L_0001 CGP 16:20333052-20404737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006968 TAS cellular defense response
GO:0007157 IDA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IDA leukocyte cell-cell adhesion
GO:0008285 TAS negative regulation of cell proliferation
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0019864 IDA IgG binding
GO:0019898 TAS extrinsic component of membrane
GO:0031225 IDA anchored component of membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0072372 IDA primary cilium
GO:1990266 IDA neutrophil migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033263 Umod-201 protein_coding Mus_musculus 0 1376

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