C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoskeleton associated protein 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169607 CKAP2L 9606 - 2:112736607-112764677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302450 CKAP2L-001 112736607-112764677 protein_coding
  ENST00000435431 CKAP2L-002 112737867-112764617 nonsense_mediated_decay
  ENST00000461876 CKAP2L-003 112756954-112764664 processed_transcript
  ENST00000474331 CKAP2L-006 112742431-112756074 retained_intron
  ENST00000481732 CKAP2L-005 112756775-112764618 processed_transcript
  ENST00000497357 CKAP2L-004 112757194-112764117 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000302450ENST00000435431ENST00000474331ENST00000481732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000302450 0.043±0.00 0.061±0.00 0.008±0.00 0.022±0.00 N/A 0.600±0.00 0.010±0.01 N/A N/A 1.248±0.85 0.056±0.00 0.745±0.25
ENST00000435431 N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A 0.084±0.00 1.872±1.03 0.289±0.09 1.858±0.02
ENST00000474331 N/A N/A N/A N/A 0.078±0.00 N/A 0.014±0.00 N/A N/A 5.881±0.00 N/A 4.180±0.00
ENST00000481732 N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018W CIL_00018W_0001 CGP 2:112736607-112784590

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092098 CKAP2L cytoskeleton associated protein 2-like protein_coding Danio_rerio
ENSMUSG00000048327 Ckap2l cytoskeleton associated protein 2-like protein_coding Mus_musculus

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