C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00018W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169607-ENSG00000115008 CGP 9606 2:112736607-112784590
GeneTranscriptPositionBiotype
ENSG00000115008 (IL1A)
interleukin 1, alpha 		ENST00000263339 (IL1A-001) 112773915-112784590 protein_coding
ENSG00000169607 (CKAP2L)
cytoskeleton associated protein 2-like 		ENST00000302450 (CKAP2L-001) 112736607-112764677 protein_coding
ENST00000435431 (CKAP2L-002) 112737867-112764617 nonsense_mediated_decay
ENST00000461876 (CKAP2L-003) 112756954-112764664 processed_transcript
ENST00000474331 (CKAP2L-006) 112742431-112756074 retained_intron
ENST00000481732 (CKAP2L-005) 112756775-112764618 processed_transcript
ENST00000497357 (CKAP2L-004) 112757194-112764117 processed_transcript
CIL_00018W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048327-ENSMUSG00000027399 CGP 10090 2:129268210-129309972
GeneTranscriptPositionBiotype
ENSMUSG00000027399 (Il1a)
interleukin 1 alpha 		ENSMUST00000028882 (Il1a-001) 129299610-129309972 protein_coding
ENSMUSG00000048327 (Ckap2l)
cytoskeleton associated protein 2-like 		ENSMUST00000052708 (Ckap2l-001) 129268210-129297212 protein_coding
ENSMUSG00000085498 (Gm14023)
predicted gene 14023 		ENSMUST00000144178 (Gm14023-001) 129297370-129307826 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018W_0001ENSG00000115008ENST00000263339ENSG00000169607ENST00000302450ENST00000435431ENST00000461876ENST00000474331ENST00000481732ENST00000497357CIL_00018W_0002ENSMUSG00000027399ENSMUST00000028882ENSMUSG00000048327ENSMUST00000052708ENSMUSG00000085498ENSMUST00000144178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018W_0001ENSG00000115008ENST00000263339ENSG00000169607ENST00000302450ENST00000435431ENST00000474331ENST00000481732CIL_00018W_0002ENSMUSG00000027399ENSMUST00000028882ENSMUSG00000048327ENSMUST00000052708ENSMUSG00000085498ENSMUST00000144178
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115008 ENST00000263339 0.029±0.00 N/A N/A 0.098±0.00 0.026±0.02 N/A 0.004±0.00 0.037±0.00 0.023±0.00 0.668±0.12 N/A 2.208±2.51 0.385±0.20 3.632±1.63
ENSG00000169607 ENST00000302450 0.043±0.00 0.061±0.00 0.008±0.00 0.022±0.00 N/A 0.600±0.00 0.010±0.01 N/A N/A N/A N/A 1.248±0.85 0.056±0.00 0.745±0.25
ENST00000435431 N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A 0.084±0.00 N/A N/A 1.872±1.03 0.289±0.09 1.858±0.02
ENST00000461876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474331 N/A N/A N/A N/A 0.078±0.00 N/A 0.014±0.00 N/A N/A N/A N/A 5.881±0.00 N/A 4.180±0.00
ENST00000481732 N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027399 ENSMUST00000028882 0.080±0.03 0.135±0.09 N/A 0.168±0.01 0.194±0.05 0.099±0.06 0.055±0.00 0.094±0.01 2.347±1.72 1.605±0.27 0.075±0.02 0.248±0.12 0.939±0.22 0.500±0.11
ENSMUSG00000048327 ENSMUST00000052708 0.289±0.22 0.161±0.06 0.228±0.00 1.188±0.93 0.147±0.10 0.919±0.17 0.050±0.01 0.063±0.03 5.989±5.38 0.304±0.17 0.043±0.02 1.394±1.41 5.402±4.35 5.221±5.08
ENSMUSG00000085498 ENSMUST00000144178 0.325±0.09 0.253±0.12 0.606±0.00 0.123±0.06 0.262±0.10 0.202±0.12 0.228±0.08 0.360±0.16 0.660±0.19 0.453±0.00 0.280±0.15 0.426±0.33 0.205±0.06 1.300±0.74

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