C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: OTU deubiquitinase 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169918 OTUD7A 9606 - 15:31475398-31870789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307050 OTUD7A-001 31475398-31655339 protein_coding
  ENST00000558371 OTUD7A-003 31558183-31870578 retained_intron
  ENST00000560536 OTUD7A-002 31555999-31870789 nonsense_mediated_decay
  ENST00000560598 OTUD7A-004 31570018-31870677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307050ENST00000558371ENST00000560536ENST00000560598
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307050 0.110±0.00 2.865±0.00 0.127±0.07 0.074±0.03 0.051±0.03 0.116±0.03 0.045±0.02 0.026±0.00 0.044±0.00 0.117±0.07 0.053±0.02 0.549±0.04
ENST00000558371 N/A N/A 0.159±0.00 N/A 0.061±0.00 N/A N/A N/A 0.199±0.00 N/A N/A N/A
ENST00000560536 N/A N/A N/A N/A 0.023±0.00 0.058±0.00 0.027±0.00 N/A N/A 0.256±0.00 0.012±0.00 0.375±0.00
ENST00000560598 N/A N/A 0.696±0.00 N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081G CIL_00081G_0001 VISTA 15:31003587-31608005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0035871 IDA protein K11-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045556 OTUD7A OTU deubiquitinase 7A protein_coding Danio_rerio
ENSMUSG00000033510 Otud7a OTU domain containing 7A protein_coding Mus_musculus

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