C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cartilage associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170275 CRTAP 9606 + 3:33113979-33147773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320954 CRTAP-001 33113979-33147773 protein_coding
  ENST00000449224 CRTAP-003 33114054-33143158 protein_coding
  ENST00000485310 CRTAP-004 33115275-33132600 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320954ENST00000449224ENST00000485310
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320954 19.246±0.00 N/A 2.443±0.00 17.812±0.00 22.614±20.96 14.476±12.86 4.241±2.25 9.596±0.00 7.429±5.57 13.368±0.00 N/A 10.544±6.31 5.568±1.60 12.531±8.74
ENST00000449224 95.146±0.00 64.082±0.00 7.981±0.00 5.232±0.00 64.930±47.42 60.161±50.28 15.864±11.44 28.128±22.65 18.765±1.59 49.967±37.64 19.511±12.97 48.371±35.91 51.652±26.96 46.235±24.38
ENST00000485310 69.989±0.00 N/A N/A N/A 16.895±0.00 N/A N/A N/A N/A N/A N/A 42.633±30.87 77.355±0.00 21.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T5 CIL_0001T5_0002 CGP 3:33113979-33219215

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005783 IDA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0007283 IEA spermatogenesis
GO:0018400 IEA peptidyl-proline hydroxylation to 3-hydroxy-L-proline
GO:0030198 TAS extracellular matrix organization
GO:0032403 ISS protein complex binding
GO:0032991 ISS macromolecular complex
GO:0050821 IMP protein stabilization
GO:0061077 ISS chaperone-mediated protein folding
GO:1901874 IMP negative regulation of post-translational protein modification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018010 crtap cartilage associated protein protein_coding Danio_rerio
ENSMUSG00000032431 Crtap cartilage associated protein protein_coding Mus_musculus

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