C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cartilage associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320954 CRTAP-001 ENSG00000170275 9606 + 3:33113979-33147773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000320954
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000320954 19.246±0.00 2.443±0.00 17.812±0.00 22.614±20.96 14.476±12.86 4.241±2.25 9.596±0.00 7.429±5.57 13.368±0.00 10.544±6.31 5.568±1.60 12.531±8.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T5 CIL_0001T5_0002 CGP 3:33113979-33219215

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005783 IDA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0007283 IEA spermatogenesis
GO:0018400 IEA peptidyl-proline hydroxylation to 3-hydroxy-L-proline
GO:0030198 TAS extracellular matrix organization
GO:0032403 ISS protein complex binding
GO:0032991 ISS macromolecular complex
GO:0050821 IMP protein stabilization
GO:0061077 ISS chaperone-mediated protein folding
GO:1901874 IMP negative regulation of post-translational protein modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084881 Crtap-001 protein_coding Mus_musculus 0 1332
ENSMUST00000066489 Leprel4-001 protein_coding Mus_musculus 7e-27 128

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