C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM and PDZ domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170324 FRMPD2 9606 - 10:48156558-48274870 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305531 FRMPD2-005 48156559-48251757 protein_coding
  ENST00000374201 FRMPD2-001 48156558-48274870 protein_coding
  ENST00000463706 FRMPD2-006 48158893-48178890 processed_transcript
  ENST00000468556 FRMPD2-002 48242046-48251653 retained_intron
  ENST00000474573 FRMPD2-007 48156558-48176212 protein_coding
  ENST00000477710 FRMPD2-010 48174895-48176345 retained_intron
  ENST00000486151 FRMPD2-004 48177293-48274674 retained_intron
  ENST00000491130 FRMPD2-008 48156767-48175143 retained_intron
  ENST00000492045 FRMPD2-003 48248543-48251611 retained_intron
  ENST00000494505 FRMPD2-009 48187194-48201448 processed_transcript
  ENST00000505547 FRMPD2-012 48199668-48201654 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000305531ENST00000374201ENST00000463706ENST00000474573ENST00000477710ENST00000486151ENST00000491130
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000305531 0.007±0.00 N/A N/A N/A 0.033±0.00 0.010±0.00 N/A N/A 0.211±0.00 N/A 0.024±0.00 0.429±0.18
ENST00000374201 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A
ENST00000463706 N/A N/A N/A 0.066±0.03 N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.585±0.28
ENST00000474573 N/A N/A 0.668±0.00 N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A
ENST00000477710 N/A 0.238±0.00 N/A N/A N/A N/A N/A 0.188±0.00 N/A 0.590±0.43 N/A N/A
ENST00000486151 N/A N/A N/A 0.017±0.00 0.004±0.00 N/A 0.052±0.01 0.109±0.00 0.111±0.00 0.132±0.02 0.039±0.00 N/A
ENST00000491130 N/A N/A 2.470±0.35 0.071±0.00 N/A N/A N/A 0.009±0.00 0.397±0.00 N/A N/A 0.870±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005923 IDA tight junction
GO:0016323 IDA basolateral plasma membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0070830 IMP tight junction assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074119 protein_coding Danio_rerio
ENSDARG00000075459 ptpn20 protein tyrosine phosphatase, non-receptor type 20 protein_coding Danio_rerio

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