C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000075459 ptpn20 7955 + 13:31401425-31454811 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111705 ptpn20-201 31401425-31454811 protein_coding
  ENSDART00000132326 ptpn20-006 31429041-31449962 protein_coding
  ENSDART00000133774 ptpn20-002 31403686-31404612 protein_coding
  ENSDART00000137664 ptpn20-003 31405705-31406146 protein_coding
  ENSDART00000144568 ptpn20-001 31401536-31402138 protein_coding
  ENSDART00000147085 ptpn20-004 31408398-31409385 protein_coding
  ENSDART00000147936 ptpn20-005 31416105-31420193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000111705ENSDART00000132326ENSDART00000133774ENSDART00000147936
Transcript ID Heart Kidney Liver Muscle
ENSDART00000111705 0.110±0.03 0.089±0.00 0.022±0.00 0.097±0.00
ENSDART00000132326 0.308±0.24 0.344±0.00 N/A 0.134±0.00
ENSDART00000133774 0.149±0.00 N/A N/A N/A
ENSDART00000147936 N/A N/A N/A 0.113±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BW CIL_0007BW_0002 CGP 13:31371120-31454811
CIL_0006FW CIL_0006FW_0001 CGP 13:31401425-31513227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170324 FRMPD2 FERM and PDZ domain containing 2 protein_coding Homo_sapiens
ENSG00000204179 PTPN20A protein tyrosine phosphatase, non-receptor type 20A protein_coding Homo_sapiens
ENSMUSG00000021940 Ptpn20 protein tyrosine phosphatase, non-receptor type 20 protein_coding Mus_musculus

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