C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proliferation-associated 2G4, 38kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170515 PA2G4 9606 + 12:56104319-56113907 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303305 PA2G4-001 56104319-56113861 protein_coding
  ENST00000550166 PA2G4-007 56106693-56109928 retained_intron
  ENST00000551061 PA2G4-009 56106162-56107219 protein_coding
  ENST00000552266 PA2G4-005 56110565-56111509 retained_intron
  ENST00000552528 PA2G4-006 56109869-56110620 retained_intron
  ENST00000552766 PA2G4-010 56104537-56113907 protein_coding
  ENST00000553057 PA2G4-008 56104919-56109901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303305ENST00000552766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303305 39.779±0.00 38.932±0.00 4.089±0.00 20.381±9.13 17.597±7.88 27.721±18.80 13.284±7.40 17.578±10.71 13.933±4.62 22.451±15.49 28.343±20.49 47.551±16.57 39.821±14.19 32.997±16.54
ENST00000552766 N/A N/A N/A N/A N/A N/A N/A N/A 6.014±0.00 N/A N/A 184.648±0.00 46.221±1.00 60.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TJ CIL_0002TJ_0003 CGP 12:56079857-56109289

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0006417 IEA regulation of translation
GO:0007050 TAS cell cycle arrest
GO:0008152 IEA metabolic process
GO:0008283 TAS cell proliferation
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0030529 IEA ribonucleoprotein complex
GO:0031625 IPI ubiquitin protein ligase binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039578 pa2g4a proliferation-associated 2G4, a protein_coding Danio_rerio
ENSDARG00000070657 pa2g4b proliferation-associated 2G4, b protein_coding Danio_rerio
ENSMUSG00000025364 Pa2g4 proliferation-associated 2G4 protein_coding Mus_musculus

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