C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proliferation-associated 2G4, 38kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303305 PA2G4-001 ENSG00000170515 9606 + 12:56104319-56113861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303305 39.779±0.00 38.932±0.00 4.089±0.00 20.381±9.13 17.597±7.88 27.721±18.80 13.284±7.40 17.578±10.71 13.933±4.62 22.451±15.49 28.343±20.49 47.551±16.57 39.821±14.19 32.997±16.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TJ CIL_0002TJ_0003 CGP 12:56079857-56109289

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0006417 IEA regulation of translation
GO:0007050 TAS cell cycle arrest
GO:0008283 TAS cell proliferation
GO:0016020 IDA membrane
GO:0030529 IEA ribonucleoprotein complex
GO:0031625 IPI ubiquitin protein ligase binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026425 Pa2g4-001 protein_coding Mus_musculus 0 2065
ENSMUST00000131728 Pa2g4-002 protein_coding Mus_musculus 0 771
ENSMUST00000147068 Pa2g4-003 retained_intron Mus_musculus 0 346

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