C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 6 interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170540 ARL6IP1 9606 - 16:18791667-18801678 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304414 ARL6IP1-001 18791667-18801678 protein_coding
  ENST00000546206 ARL6IP1-002 18792947-18801424 protein_coding
  ENST00000562234 ARL6IP1-006 18794674-18801553 protein_coding
  ENST00000562819 ARL6IP1-008 18793022-18801547 protein_coding
  ENST00000563861 ARL6IP1-003 18792879-18801547 nonsense_mediated_decay
  ENST00000566391 ARL6IP1-005 18798171-18801572 retained_intron
  ENST00000567969 ARL6IP1-004 18797712-18801544 retained_intron
  ENST00000569976 ARL6IP1-007 18795176-18801548 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000304414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000304414 55.577±0.00 35.974±0.00 30.238±0.00 141.477±40.59 42.956±13.29 50.377±5.90 10.448±4.94 56.975±0.69 29.535±4.64 36.343±9.59 44.452±10.81 42.546±2.64 62.797±6.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GM CIL_0007GM_0002 CGP 16:18791667-18926454

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005784 IEA Sec61 translocon complex
GO:0005829 IEA cytosol
GO:0006613 IEA cotranslational protein targeting to membrane
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054578 arl6ip1 ADP-ribosylation factor-like 6 interacting protein 1 protein_coding Danio_rerio
ENSMUSG00000030654 Arl6ip1 ADP-ribosylation factor-like 6 interacting protein 1 protein_coding Mus_musculus

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