C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007GM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054578-ENSDARG00000054570 CGP 7955 3:31256010-31309502
GeneTranscriptPositionBiotype
ENSDARG00000054570 (smg1)
PI-3-kinase-related kinase SMG-1
ENSDART00000076764 (smg1-001) 31269149-31309501 protein_coding
ENSDART00000076796 (smg1-201) 31270318-31309502 protein_coding
ENSDARG00000054578 (arl6ip1)
ADP-ribosylation factor-like 6 interacting protein 1
ENSDART00000058955 (arl6ip1-001) 31256010-31267115 protein_coding
ENSDART00000139090 (arl6ip1-002) 31258586-31266720 protein_coding
ENSDART00000145382 (arl6ip1-003) 31256487-31259762 retained_intron
CIL_0007GM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170540-ENSG00000157106 CGP 9606 16:18791667-18926454
GeneTranscriptPositionBiotype
ENSG00000170540 (ARL6IP1)
ADP-ribosylation factor-like 6 interacting protein 1
ENST00000304414 (ARL6IP1-001) 18791667-18801678 protein_coding
ENST00000546206 (ARL6IP1-002) 18792947-18801424 protein_coding
ENST00000562234 (ARL6IP1-006) 18794674-18801553 protein_coding
ENST00000562819 (ARL6IP1-008) 18793022-18801547 protein_coding
ENST00000563861 (ARL6IP1-003) 18792879-18801547 nonsense_mediated_decay
ENST00000566391 (ARL6IP1-005) 18798171-18801572 retained_intron
ENST00000567969 (ARL6IP1-004) 18797712-18801544 retained_intron
ENST00000569976 (ARL6IP1-007) 18795176-18801548 retained_intron
CIL_0007GM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030654-ENSMUSG00000030655 CGP 10090 7:118118891-118243637
GeneTranscriptPositionBiotype
ENSMUSG00000030654 (Arl6ip1)
ADP-ribosylation factor-like 6 interacting protein 1
ENSMUST00000032888 (Arl6ip1-201) 118118891-118129625 protein_coding
ENSMUSG00000030655 (Smg1)
SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
ENSMUST00000032891 (Smg1-001) 118131308-118243637 protein_coding
ENSMUST00000178025 (Smg1-006) 118140785-118141799 protein_coding
ENSMUST00000179047 (Smg1-002) 118200696-118243627 protein_coding
ENSMUST00000179331 (Smg1-005) 118134047-118217830 protein_coding
ENSMUST00000179847 (Smg1-004) 118203765-118243349 retained_intron
ENSMUST00000180009 (Smg1-003) 118196195-118243637 retained_intron
ENSMUSG00000065874 (Gm25683)
predicted gene, 25683
ENSMUST00000083940 (Gm25683-201) 118153480-118153610 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GM_0001ENSDARG00000054570ENSDART00000076764ENSDART00000076796ENSDARG00000054578ENSDART00000058955ENSDART00000139090ENSDART00000145382CIL_0007GM_0002ENSG00000170540ENST00000304414ENST00000546206ENST00000562234ENST00000562819ENST00000563861ENST00000566391ENST00000567969ENST00000569976CIL_0007GM_0003ENSMUSG00000030654ENSMUST00000032888ENSMUSG00000030655ENSMUST00000032891ENSMUST00000178025ENSMUST00000179047ENSMUST00000179331ENSMUST00000179847ENSMUST00000180009ENSMUSG00000065874ENSMUST00000083940
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007GM_0001ENSDARG00000054570ENSDART00000076764ENSDART00000076796ENSDARG00000054578ENSDART00000058955CIL_0007GM_0002ENSG00000170540ENST00000304414CIL_0007GM_0003ENSMUSG00000030654ENSMUST00000032888ENSMUSG00000030655ENSMUST00000032891ENSMUST00000179047ENSMUST00000179331ENSMUSG00000065874ENSMUST00000083940
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054570 ENSDART00000076764 N/A N/A N/A 11.276±0.67 N/A N/A 2.076±2.06 2.443±1.31 1.915±0.00 N/A 2.235±0.00 N/A N/A N/A
ENSDART00000076796 N/A N/A N/A 1.773±0.00 N/A N/A 0.940±0.00 0.427±0.02 N/A N/A N/A N/A N/A N/A
ENSDARG00000054578 ENSDART00000058955 N/A N/A N/A 148.674±9.16 N/A N/A 142.957±19.18 105.763±0.00 7.903±0.00 N/A 284.103±0.00 N/A N/A N/A
ENSDART00000139090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170540 ENST00000304414 55.577±0.00 35.974±0.00 30.238±0.00 141.477±40.59 42.956±13.29 50.377±5.90 10.448±4.94 56.975±0.69 29.535±4.64 36.343±9.59 N/A 44.452±10.81 42.546±2.64 62.797±6.74
ENST00000546206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030654 ENSMUST00000032888 44.601±4.27 28.741±2.36 57.492±3.44 67.769±25.02 39.770±8.37 25.950±3.37 10.210±0.55 133.035±14.76 72.720±26.71 56.055±6.81 3.602±0.87 28.578±9.19 99.717±50.60 56.475±26.72
ENSMUSG00000030655 ENSMUST00000032891 6.883±3.47 5.763±0.71 5.878±2.30 3.445±0.05 9.121±3.32 5.505±1.53 1.471±0.44 3.464±1.28 2.644±1.62 8.465±1.50 2.698±1.22 8.008±4.07 5.861±2.26 5.888±2.81
ENSMUST00000178025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179047 N/A 11.574±2.92 N/A N/A 8.454±0.15 N/A N/A N/A N/A N/A N/A 10.985±1.73 N/A N/A
ENSMUST00000179331 1.357±0.00 N/A N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A N/A N/A 4.837±0.00 3.508±0.76
ENSMUST00000179847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065874 ENSMUST00000083940 N/A N/A N/A 4.680±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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