C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170906 NDUFA3 9606 + 19:54102728-54109257 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303553 NDUFA3-006 54102885-54106961 protein_coding
  ENST00000391762 NDUFA3-004 54102852-54106961 protein_coding
  ENST00000391763 NDUFA3-005 54102869-54106965 protein_coding
  ENST00000391764 NDUFA3-011 54102869-54108533 protein_coding
  ENST00000417903 NDUFA3-003 54102728-54106961 nonsense_mediated_decay
  ENST00000419113 NDUFA3-010 54102821-54108704 nonsense_mediated_decay
  ENST00000420296 NDUFA3-008 54105965-54106961 protein_coding
  ENST00000422029 NDUFA3-009 54103114-54108726 nonsense_mediated_decay
  ENST00000451517 NDUFA3-002 54102855-54106961 nonsense_mediated_decay
  ENST00000471292 NDUFA3-007 54102855-54106470 protein_coding
  ENST00000480713 NDUFA3-013 54108547-54108929 processed_transcript
  ENST00000482960 NDUFA3-014 54108704-54109257 processed_transcript
  ENST00000484103 NDUFA3-015 54102877-54106961 retained_intron
  ENST00000485876 NDUFA3-001 54102837-54107568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000391762ENST00000391763ENST00000419113
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000391762 N/A N/A N/A N/A N/A N/A 10.378±0.00 N/A N/A N/A N/A N/A N/A
ENST00000391763 61.665±0.00 125.404±0.00 116.163±0.00 112.766±0.00 91.098±0.00 99.147±88.25 118.593±0.00 110.931±0.00 152.120±0.00 133.887±93.22 190.722±36.48 186.313±5.83 113.002±0.00
ENST00000419113 N/A N/A 10.631±0.00 N/A N/A N/A N/A N/A 3.152±0.00 19.818±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021A CIL_00021A_0001 CGP 19:54094668-54109257
CIL_0005NN CIL_0005NN_0001 CGP 19:54102728-54115675

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IEA mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041400 NDUFA3 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa protein_coding Danio_rerio
ENSMUSG00000035674 Ndufa3 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 protein_coding Mus_musculus

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