C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170906-ENSG00000105619 CGP 9606 19:54102728-54115675
GeneTranscriptPositionBiotype
ENSG00000105618 (PRPF31)
pre-mRNA processing factor 31 		ENST00000321030 (PRPF31-001) 54115457-54131709 protein_coding
ENST00000391755 (PRPF31-003) 54118271-54131709 protein_coding
ENST00000419967 (PRPF31-201) 54115410-54131719 protein_coding
ENST00000445124 (PRPF31-006) 54115779-54124630 protein_coding
ENST00000445811 (PRPF31-005) 54115754-54124654 protein_coding
ENST00000447810 (PRPF31-009) 54115809-54124583 protein_coding
ENST00000466404 (PRPF31-004) 54118409-54131709 retained_intron
ENST00000467851 (PRPF31-010) 54118406-54118811 retained_intron
ENST00000498612 (PRPF31-008) 54118613-54128197 processed_transcript
CIL_0005NN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035674-ENSMUSG00000006335 CGP 10090 7:3617373-3629929
GeneTranscriptPositionBiotype
ENSMUSG00000006335 (Tfpt)
TCF3 (E2A) fusion partner 		ENSMUST00000058880 (Tfpt-005) 3620335-3629086 nonsense_mediated_decay
ENSMUST00000108641 (Tfpt-001) 3620324-3629929 protein_coding
ENSMUST00000153143 (Tfpt-003) 3624594-3629579 nonsense_mediated_decay
ENSMUST00000155592 (Tfpt-002) 3620324-3629884 protein_coding
ENSMUST00000156194 (Tfpt-004) 3620779-3629579 processed_transcript
ENSMUSG00000035674 (Ndufa3)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 		ENSMUST00000076657 (Ndufa3-001) 3617373-3620161 protein_coding
ENSMUST00000108644 (Ndufa3-004) 3617386-3620128 protein_coding
ENSMUST00000134683 (Ndufa3-005) 3617617-3620085 nonsense_mediated_decay
ENSMUST00000148403 (Ndufa3-006) 3617391-3620163 nonsense_mediated_decay
ENSMUST00000150497 (Ndufa3-002) 3617380-3620152 retained_intron
ENSMUST00000156712 (Ndufa3-003) 3617385-3617719 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NN_0001ENSG00000105618ENST00000321030ENST00000391755ENST00000419967ENST00000445124ENST00000445811ENST00000447810ENST00000466404ENST00000467851ENST00000498612CIL_0005NN_0002ENSMUSG00000006335ENSMUST00000058880ENSMUST00000108641ENSMUST00000153143ENSMUST00000155592ENSMUST00000156194ENSMUSG00000035674ENSMUST00000076657ENSMUST00000108644ENSMUST00000134683ENSMUST00000148403ENSMUST00000150497ENSMUST00000156712
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NN_0001ENSG00000105618ENST00000321030ENST00000391755ENST00000419967ENST00000445124ENST00000498612CIL_0005NN_0002ENSMUSG00000006335ENSMUST00000058880ENSMUST00000108641ENSMUST00000153143ENSMUST00000155592ENSMUST00000156194ENSMUSG00000035674ENSMUST00000076657ENSMUST00000108644ENSMUST00000148403ENSMUST00000150497
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105618 ENST00000321030 7.768±0.00 N/A 2.426±0.00 9.719±4.49 4.901±0.00 4.077±0.00 0.852±0.00 5.650±0.00 6.844±0.00 1.148±0.00 N/A 8.919±3.88 16.784±3.31 N/A
ENST00000391755 19.904±0.00 37.081±0.00 N/A 21.225±0.00 13.804±10.44 20.998±0.00 7.551±6.61 13.068±11.00 15.972±0.00 9.786±8.30 10.283±0.00 26.247±10.90 24.664±3.01 24.034±0.00
ENST00000419967 N/A 14.634±0.00 N/A 2.471±0.00 N/A 7.519±5.25 0.630±0.00 N/A N/A 1.719±0.00 7.988±0.00 N/A N/A 10.795±1.17
ENST00000445124 N/A N/A N/A N/A N/A N/A N/A N/A 3.815±0.00 N/A N/A N/A N/A N/A
ENST00000445811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.159±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006335 ENSMUST00000058880 1.357±0.00 0.529±0.00 N/A N/A 0.982±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108641 2.481±0.54 1.403±0.57 4.596±0.66 6.658±2.29 2.020±0.71 2.078±0.97 2.424±0.76 2.452±0.58 3.658±2.46 2.190±0.37 2.577±0.77 2.640±2.11 7.374±3.18 4.998±1.85
ENSMUST00000153143 N/A N/A N/A 22.871±0.00 N/A N/A N/A N/A N/A N/A N/A 29.969±0.00 19.780±0.88 18.040±0.00
ENSMUST00000155592 2.977±1.23 1.383±0.85 6.066±0.92 5.310±1.35 1.301±0.60 1.289±0.47 2.065±0.88 2.243±0.63 2.156±1.01 1.619±0.50 4.114±1.15 4.249±3.69 3.755±1.22 5.811±0.78
ENSMUST00000156194 N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A N/A N/A N/A 2.412±0.58 4.587±0.34 N/A
ENSMUSG00000035674 ENSMUST00000076657 287.295±69.14 272.585±10.25 256.981±43.76 132.217±62.48 341.432±113.10 320.013±42.51 910.058±294.98 720.052±48.64 313.018±90.13 152.729±14.74 421.115±42.61 253.658±81.56 170.419±64.63 97.758±44.73
ENSMUST00000108644 N/A 32.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148403 N/A N/A N/A 50.800±0.00 N/A N/A N/A N/A N/A N/A N/A 43.625±0.00 26.417±0.00 N/A
ENSMUST00000150497 9.210±0.64 N/A N/A N/A 9.206±0.75 11.805±1.45 N/A N/A N/A 7.819±0.93 N/A N/A N/A 1.770±1.19
ENSMUST00000156712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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