C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein kinase C, delta binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170955 PRKCDBP 9606 - 11:6318946-6320647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303927 PRKCDBP-001 6318946-6320647 protein_coding
  ENST00000524852 PRKCDBP-003 6319130-6320155 retained_intron
  ENST00000530979 PRKCDBP-004 6319144-6320532 protein_coding
  ENST00000532354 PRKCDBP-002 6318946-6320062 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303927ENST00000524852ENST00000530979ENST00000532354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303927 28.948±0.00 35.563±0.00 0.580±0.00 1.079±0.45 16.099±15.17 11.180±9.71 5.804±4.02 7.118±6.23 4.995±1.35 14.185±13.18 6.906±5.65 21.463±20.58 50.944±27.23 25.055±0.00
ENST00000524852 N/A N/A N/A 0.570±0.00 N/A 4.742±4.17 0.720±0.00 4.708±0.00 N/A 1.155±0.00 N/A 4.105±0.00 N/A 40.219±10.47
ENST00000530979 12.425±0.00 24.133±0.00 N/A N/A 32.206±0.00 5.660±0.00 N/A N/A N/A N/A N/A 2.398±0.00 9.471±0.00 N/A
ENST00000532354 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.970±0.00 9.890±0.00 37.195±5.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077J CIL_00077J_0001 CGP 11:6259736-6320647
CIL_00079D CIL_00079D_0001 CGP 11:6318946-6394998

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005080 IEA protein kinase C binding
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005901 IDA caveola
GO:0030866 IEA cortical actin cytoskeleton organization
GO:0032922 ISS circadian regulation of gene expression
GO:0043234 IDA protein complex
GO:0051898 IEA negative regulation of protein kinase B signaling
GO:0070374 IEA positive regulation of ERK1 and ERK2 cascade
GO:1901003 IEA negative regulation of fermentation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027611 sdpra serum deprivation response a protein_coding Danio_rerio
ENSDARG00000071196 sdprb serum deprivation response b protein_coding Danio_rerio
ENSMUSG00000037060 Prkcdbp protein kinase C, delta binding protein protein_coding Mus_musculus

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