C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170955-ENSG00000166311 CGP 9606 11:6318946-6394998
GeneTranscriptPositionBiotype
ENSG00000166311 (SMPD1)
sphingomyelin phosphodiesterase 1, acid lysosomal 		ENST00000342245 (SMPD1-001) 6390431-6394995 protein_coding
ENST00000526280 (SMPD1-004) 6391877-6394998 protein_coding
ENST00000527275 (SMPD1-008) 6390475-6394778 protein_coding
ENST00000530395 (SMPD1-009) 6390446-6392042 protein_coding
ENST00000531303 (SMPD1-003) 6390582-6394778 nonsense_mediated_decay
ENST00000531336 (SMPD1-006) 6393293-6394373 retained_intron
ENST00000532367 (SMPD1-005) 6393518-6394128 retained_intron
ENST00000533123 (SMPD1-002) 6390503-6394998 nonsense_mediated_decay
ENST00000533196 (SMPD1-010) 6390440-6392056 processed_transcript
ENST00000534405 (SMPD1-007) 6390473-6394991 nonsense_mediated_decay
ENSG00000170955 (PRKCDBP)
protein kinase C, delta binding protein 		ENST00000303927 (PRKCDBP-001) 6318946-6320647 protein_coding
ENST00000524852 (PRKCDBP-003) 6319130-6320155 retained_intron
ENST00000530979 (PRKCDBP-004) 6319144-6320532 protein_coding
ENST00000532354 (PRKCDBP-002) 6318946-6320062 retained_intron
ENSG00000254443 (RP11-304C12.3)
 ENST00000531479 (RP11-304C12.3-001) 6362812-6365267 lincRNA
ENST00000532430 (RP11-304C12.3-002) 6362799-6365262 lincRNA
CIL_00079D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037060-ENSMUSG00000037049 CGP 10090 7:105480607-105558388
GeneTranscriptPositionBiotype
ENSMUSG00000037049 (Smpd1)
sphingomyelin phosphodiesterase 1, acid lysosomal 		ENSMUST00000046983 (Smpd1-201) 105554360-105558388 protein_coding
ENSMUSG00000037060 (Prkcdbp)
protein kinase C, delta binding protein 		ENSMUST00000047040 (Prkcdbp-201) 105480607-105482197 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079D_0001ENSG00000166311ENST00000342245ENST00000526280ENST00000527275ENST00000530395ENST00000531303ENST00000531336ENST00000532367ENST00000533123ENST00000533196ENST00000534405ENSG00000170955ENST00000303927ENST00000524852ENST00000530979ENST00000532354ENSG00000254443ENST00000531479ENST00000532430CIL_00079D_0002ENSMUSG00000037049ENSMUST00000046983ENSMUSG00000037060ENSMUST00000047040
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079D_0001ENSG00000166311ENST00000342245ENST00000526280ENST00000527275ENST00000531303ENST00000531336ENST00000533123ENST00000534405ENSG00000170955ENST00000303927ENST00000524852ENST00000530979ENST00000532354ENSG00000254443ENST00000531479ENST00000532430CIL_00079D_0002ENSMUSG00000037049ENSMUST00000046983ENSMUSG00000037060ENSMUST00000047040
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166311 ENST00000342245 7.480±0.00 8.963±0.00 1.860±0.00 8.753±4.54 3.148±2.06 0.861±0.00 7.042±5.56 17.162±8.90 18.292±16.27 7.327±0.00 5.524±3.44 9.294±7.22 28.036±12.13 0.798±0.00
ENST00000526280 N/A 5.455±0.00 N/A 6.786±0.00 N/A N/A N/A 32.298±0.00 N/A N/A N/A N/A N/A N/A
ENST00000527275 N/A N/A 1.379±0.00 N/A N/A 1.549±0.00 N/A N/A N/A 1.418±0.00 N/A 1.237±0.46 N/A N/A
ENST00000530395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531303 N/A N/A N/A N/A 0.574±0.00 0.676±0.00 1.146±0.00 N/A 0.748±0.00 N/A N/A 2.316±0.00 N/A 1.030±0.00
ENST00000531336 N/A N/A N/A 8.263±0.00 N/A N/A N/A N/A N/A N/A N/A 5.601±0.00 12.445±0.00 1.249±0.00
ENST00000532367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533123 3.326±0.00 N/A N/A N/A 4.920±0.00 4.357±0.00 N/A N/A N/A N/A N/A N/A N/A 3.147±0.00
ENST00000533196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.453±0.00 N/A N/A N/A
ENSG00000170955 ENST00000303927 28.948±0.00 35.563±0.00 0.580±0.00 1.079±0.45 16.099±15.17 11.180±9.71 5.804±4.02 7.118±6.23 4.995±1.35 14.185±13.18 6.906±5.65 21.463±20.58 50.944±27.23 25.055±0.00
ENST00000524852 N/A N/A N/A 0.570±0.00 N/A 4.742±4.17 0.720±0.00 4.708±0.00 N/A 1.155±0.00 N/A 4.105±0.00 N/A 40.219±10.47
ENST00000530979 12.425±0.00 24.133±0.00 N/A N/A 32.206±0.00 5.660±0.00 N/A N/A N/A N/A N/A 2.398±0.00 9.471±0.00 N/A
ENST00000532354 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.970±0.00 9.890±0.00 37.195±5.48
ENSG00000254443 ENST00000531479 N/A N/A N/A 0.027±0.00 N/A N/A 0.033±0.00 N/A N/A 0.044±0.00 N/A 0.100±0.00 N/A N/A
ENST00000532430 N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A 0.051±0.04 N/A 0.199±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037049 ENSMUST00000046983 36.850±10.49 39.305±2.23 15.185±0.48 18.116±1.87 30.885±5.51 21.326±0.74 61.966±6.67 51.758±7.36 16.891±7.56 41.019±2.43 25.189±0.77 20.987±5.13 27.581±9.59 1.539±0.60
ENSMUSG00000037060 ENSMUST00000047040 306.243±154.64 87.328±33.23 189.172±26.08 12.133±1.49 110.433±46.79 86.807±11.91 14.758±2.10 19.005±2.60 2.793±2.10 48.262±8.17 7.451±1.15 168.368±82.34 18.141±15.50 2.307±1.47

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