C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sclerostin domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171243 SOSTDC1 9606 - 7:16461481-16530580 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307068 SOSTDC1-001 16461481-16465849 protein_coding
  ENST00000396652 SOSTDC1-002 16461543-16530580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000307068ENST00000396652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000307068 0.034±0.00 0.044±0.00 1.625±0.00 2.625±0.12 1.414±0.57 2.152±0.40 0.069±0.03 3.323±0.00 0.204±0.00 3.247±1.58 0.377±0.19 0.034±0.02 0.247±0.00
ENST00000396652 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.100±0.00 N/A 1.449±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027U CIL_00027U_0002 CGP 7:16091192-16530580

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0007389 IEA pattern specification process
GO:0010454 IEA negative regulation of cell fate commitment
GO:0016055 IEA Wnt signaling pathway
GO:0030514 IEA negative regulation of BMP signaling pathway
GO:0031069 IEA hair follicle morphogenesis
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0060648 IEA mammary gland bud morphogenesis
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068892 sostdc1a sclerostin domain containing 1a protein_coding Danio_rerio
ENSMUSG00000036169 Sostdc1 sclerostin domain containing 1 protein_coding Mus_musculus

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