C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005034-ENSDARG00000005034 CGP 7955 15:33791311-33864960
GeneTranscriptPositionBiotype
ENSDARG00000005034 (ispd)
isoprenoid synthase domain containing 		ENSDART00000003192 (ispd-001) 33791311-33864960 protein_coding
ENSDART00000140882 (ispd-002) 33791314-33854834 protein_coding
ENSDARG00000068892 (sostdc1a)
sclerostin domain containing 1a 		ENSDART00000099792 (sostdc1a-201) 33858452-33863483 protein_coding
ENSDART00000099793 (sostdc1a-001) 33858452-33863625 protein_coding
ENSDARG00000088376 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000125546 (5S_rRNA.1681-201) 33832698-33832834 rRNA

Danio rerio Ensembl (Zv9)

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CIL_00027U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214960-ENSG00000171243 CGP 9606 7:16091192-16530580
GeneTranscriptPositionBiotype
ENSG00000171243 (SOSTDC1)
sclerostin domain containing 1 		ENST00000307068 (SOSTDC1-001) 16461481-16465849 protein_coding
ENST00000396652 (SOSTDC1-002) 16461543-16530580 protein_coding
ENSG00000214960 (ISPD)
isoprenoid synthase domain containing 		ENST00000399310 (ISPD-003) 16091192-16421322 protein_coding
ENST00000407010 (ISPD-001) 16091192-16421322 protein_coding
ENST00000479493 (ISPD-002) 16276577-16301466 processed_transcript
ENSG00000224683 (RPL36AP29)
ribosomal protein L36a pseudogene 29 		ENST00000415878 (RPL36AP29-001) 16208945-16209265 processed_pseudogene
ENSG00000229688 (ISPD-AS1)
ISPD antisense RNA 1 		ENST00000436328 (ISPD-AS1-003) 16269249-16270604 antisense
ENST00000438573 (ISPD-AS1-001) 16210488-16270604 antisense
ENST00000457112 (ISPD-AS1-002) 16210544-16269247 antisense
ENST00000579293 (ISPD-AS1-005) 16210542-16248089 antisense
ENST00000582683 (ISPD-AS1-004) 16210507-16237406 antisense
ENSG00000272537 (GS1-166A23.1)
 ENST00000605985 (GS1-166A23.1-001) 16471184-16471373 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027U_0001ENSDARG00000005034ENSDART00000003192ENSDART00000140882ENSDARG00000068892ENSDART00000099792ENSDART00000099793ENSDARG00000088376ENSDART00000125546CIL_00027U_0002ENSG00000171243ENST00000307068ENST00000396652ENSG00000214960ENST00000399310ENST00000407010ENST00000479493ENSG00000224683ENST00000415878ENSG00000229688ENST00000436328ENST00000438573ENST00000457112ENST00000579293ENST00000582683ENSG00000272537ENST00000605985
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027U_0001ENSDARG00000005034ENSDART00000003192ENSDART00000140882ENSDARG00000068892ENSDART00000099792ENSDART00000099793ENSDARG00000088376ENSDART00000125546CIL_00027U_0002ENSG00000171243ENST00000307068ENST00000396652ENSG00000214960ENST00000399310ENST00000407010ENSG00000224683ENST00000415878ENSG00000229688ENST00000436328ENST00000438573ENST00000457112ENST00000579293ENST00000582683ENSG00000272537ENST00000605985
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005034 ENSDART00000003192 N/A N/A N/A 2.616±2.01 N/A N/A 7.524±0.00 2.131±2.00 N/A N/A N/A N/A N/A N/A
ENSDART00000140882 N/A N/A N/A 5.404±1.82 N/A N/A 5.370±3.39 N/A 0.148±0.00 N/A 2.221±0.00 N/A N/A N/A
ENSDARG00000068892 ENSDART00000099792 N/A N/A N/A 0.447±0.26 N/A N/A 13.243±4.81 8.649±4.44 0.073±0.00 N/A 2.162±0.00 N/A N/A N/A
ENSDART00000099793 N/A N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000088376 ENSDART00000125546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.297±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171243 ENST00000307068 0.034±0.00 0.044±0.00 1.625±0.00 2.625±0.12 1.414±0.57 2.152±0.40 0.069±0.03 3.323±0.00 0.204±0.00 3.247±1.58 N/A 0.377±0.19 0.034±0.02 0.247±0.00
ENST00000396652 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A 0.100±0.00 N/A 1.449±0.00
ENSG00000214960 ENST00000399310 0.158±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A 0.278±0.01 N/A N/A N/A
ENST00000407010 0.096±0.00 0.144±0.00 N/A 2.252±1.10 0.533±0.18 0.549±0.42 1.036±0.27 1.492±0.75 1.068±0.56 0.167±0.00 N/A 0.457±0.19 0.631±0.19 1.019±0.28
ENST00000479493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224683 ENST00000415878 N/A 0.429±0.00 N/A 0.135±0.04 N/A 0.045±0.00 0.160±0.12 N/A N/A 2.172±0.00 0.261±0.00 N/A N/A N/A
ENSG00000229688 ENST00000436328 N/A N/A N/A 0.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A
ENST00000438573 N/A 0.008±0.00 0.073±0.00 N/A N/A 0.054±0.01 0.014±0.01 N/A 0.071±0.00 N/A N/A 0.100±0.09 0.010±0.00 1.562±0.60
ENST00000457112 N/A N/A 0.082±0.00 0.041±0.00 N/A N/A 0.030±0.00 0.116±0.00 N/A N/A N/A 0.110±0.01 N/A N/A
ENST00000579293 N/A 0.095±0.00 N/A 0.101±0.07 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A
ENST00000582683 N/A 0.055±0.00 N/A N/A N/A 0.092±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000272537 ENST00000605985 0.332±0.00 N/A N/A 0.399±0.00 N/A 0.642±0.00 N/A 0.131±0.00 N/A N/A N/A 0.260±0.06 N/A 0.132±0.07

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