C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: microtubule-associated protein 1 light chain 3 beta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171471 MAP1LC3B2 9606 + 12:116575851-116576606 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000556529 MAP1LC3B2-001 116575851-116576606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556529 2.393±0.00 0.948±0.00 0.140±0.00 1.056±0.91 0.586±0.23 1.304±0.00 1.026±0.87 1.491±0.00 0.440±0.11 0.651±0.45 0.875±0.38 0.326±0.19 0.694±0.48 0.865±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006914 IEA autophagy
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020048 map1lc3b microtubule-associated protein 1 light chain 3 beta protein_coding Danio_rerio
ENSMUSG00000031812 Map1lc3b microtubule-associated protein 1 light chain 3 beta protein_coding Mus_musculus
ENSMUSG00000074501 Gm5612 predicted gene 5612 protein_coding Mus_musculus

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